| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 26 | = 39746 | 0 (0.000) | 43 (0.650) | 31/198 | 1.5 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 40 | 30802 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GCAACCAAGGCGAATACCCCGAAGATAATCGGGTTGGGAAGCACGAGCCGCACGATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 26/39646‑39746 | gCAACCAAGGCGAATACCCCGAAGATAATCGGGTTGGGAAGCACGAGCCGCACGATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACG > 2:1702162‑M1/1‑101 (MQ=255) aaGGCGAATACCCCGAAGATAATCGGGTTGGGAAGCACGAGCCGCACGATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcg < 2:349565‑M1/101‑7 (MQ=255) gCGAATACCCCGAAGATAATCGGGTTGGGAAGCACGAGCCGCACGATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgacc < 1:91218‑M1/101‑10 (MQ=255) gAATACCCCGAAGATAATCGGGTTGGGAAGCACGAGCCGCACGATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgc > 1:1076218‑M1/1‑90 (MQ=255) gAATACCCCGAAGATAATCGGGTTGGGAAGCACGAGCCGCACGATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgc > 2:1590623‑M1/1‑90 (MQ=255) aaTACCCCGAAGATAATCGGGTTGGAAAGCACGAGCCGCACGATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgcc < 2:199144‑M1/101‑13 (MQ=255) aTACCCCGAAGATAATCGGGTTGGGAAGCACGAGCCGCACGATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccg > 2:1590810‑M1/1‑88 (MQ=255) aTACCCCGAAGATAATCGGGTTGGGAAGCACGAGCCGCACGATTTTAGTTTGACCCGTCGAGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccg > 2:1709757‑M1/1‑88 (MQ=255) aGATAATCGGGTTGGGAAGCACGAGCCGCACTATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatc < 1:1078725‑M1/101‑23 (MQ=255) aGATAATCGGGTTGGGAAGCACGAGCCGCACGATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGtcggcgaccgccgtggtttatc > 1:465430‑M1/1‑79 (MQ=255) aTCGGGTTGGGAAGCACGAGCCGCACGATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcat > 1:1689069‑M1/1‑74 (MQ=255) tggggtgGGAAAGCACGAGCCGCACGATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCACCGgcggcgaccgccgtggtttatcctcatt < 1:607838‑M1/99‑29 (MQ=255) gTTGGGAAGCACGAGCCGCACGATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctac > 1:991082‑M1/1‑69 (MQ=255) ggAAGCACGAGCCGCACGATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgcccgccgtggtttatcctcattctacgctt < 2:1689063‑M1/101‑37 (MQ=255) cACGAGCCGCACGATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggc > 2:1177343‑M1/1‑60 (MQ=255) cACGAGCCGCACGATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggc > 1:1088065‑M1/1‑60 (MQ=255) ccGCACGATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcnttctangcttgcggcaagcgt > 2:1069908‑M1/1‑54 (MQ=255) cGCACGATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgtt > 2:1513357‑M1/1‑53 (MQ=255) cACGATTTTAGTTTGCCCCGTCGAGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttcc < 1:1709763‑M1/101‑51 (MQ=255) aCGATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccg < 1:1710387‑M1/101‑52 (MQ=255) aCGATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccg < 1:1106823‑M1/101‑52 (MQ=255) tttCGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcgccgaccgccgtggtatatcctcattctacgcttgcggcaagcgttccggcagc > 2:462125‑M1/1‑45 (MQ=255) tttAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccggcagc > 2:1626794‑M1/1‑45 (MQ=255) gTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccggcagctaca < 2:1459561‑M1/101‑61 (MQ=255) gTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggcttatcctcattctacgcttgcggcaagcgttccggcagctaca > 2:747359‑M1/1‑41 (MQ=255) tGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccggcagctacaccc > 1:918702‑M1/1‑38 (MQ=255) tGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccggcagctacaccc < 2:245906‑M1/101‑64 (MQ=255) gTCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccggcagctacacccgcgcca > 1:946472‑M1/1‑32 (MQ=255) tCGCGATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgtcccggcagctacacccgcgccag > 1:231755‑M1/1‑31 (MQ=255) gcgATCTGATTAAAGTGACCGCCGCAGCGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccggcagctacacccgcgccagag < 2:232834‑M1/101‑73 (MQ=255) gATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccggcagctacacccgcgccagagat > 1:1371656‑M1/1‑27 (MQ=255) gATCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccggcagctacacccgcgccagagat > 1:1715335‑M1/1‑27 (MQ=255) tCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccggcagctacacccgcgccagagataa < 2:1354578‑M1/101‑77 (MQ=255) tCTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccggcagctacacccgcgccagagataa < 2:1353903‑M1/101‑77 (MQ=255) cTGATTAAAGTGAGCGCCGCAACGtcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccggcagctacacccgcgccagagataat < 2:465425‑M1/101‑78 (MQ=255) cTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccggcagctacacccgcgccagagataat > 1:1296569‑M1/1‑24 (MQ=255) cTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccggcagctacacccgcgccagagataat < 1:1349251‑M1/101‑78 (MQ=255) cTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccggcagctacacccgcgccagagataat < 1:1702168‑M1/101‑78 (MQ=255) cTGATTAAAGTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccggcagctacacccgcgccagagataat < 2:1076213‑M1/101‑78 (MQ=255) aaGTGAGNGCNGCAANGgcggngaccgccgtggtttatnctcattctacgcttgcggcaagcgttccggcagctacacccgctccagagataatgcccctg < 2:1203060‑M1/101‑85 (MQ=255) gTGAGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccggcagctacacccgcgccagagataatgcccctgac > 2:973106‑M1/1‑15 (MQ=255) aGCGCCGCAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccggcagctacacccgcgccagagataatgcccctgacact < 2:991077‑M1/101‑90 (MQ=255) ccgcAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccagcagctacacccgcgccagagataatgcccctgacacttaag > 2:769146‑M1/1‑8 (MQ=255) gcAACGgcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgttccggcagctacacccgcgccagagataatgcccctgacacttaaggt > 1:763240‑M1/1‑6 (MQ=255) ggcggcgaccgccgtggtttatcctcattctacgcttgcggcaagcgtcccggcagctacacccgcgccagagataatgcccctgacacttaaggtgaacg < 2:231755‑M1/101‑101 (MQ=255) | GCAACCAAGGCGAATACCCCGAAGATAATCGGGTTGGGAAGCACGAGCCGCACGATTTTAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 26/39646‑39746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |