| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 25 | 1 = | 0 (0.000) | 45 (0.700) +TGCC |
38/192 | 0.5 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 33 | = 33871 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTGGGAAGCATCCGCGCAGAAGGTGAAAAACTCGCGCAGCTC > 25/1‑100 | cgcgccgatccccaccgagcgcataccgctggcgttaatggcgtcaatgcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGcc < 1:1229795‑M1/9‑1 (MQ=255)cgcgccgatccccaccgagcgcataccgctggcgttaatggcgtcaatgcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGcc > 1:1240835‑M1/93‑101 (MQ=255) ccgatccccaccgagcgcataccgctggcgttaatggcgtcaatgcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGc < 1:1429857‑M1/13‑1 (MQ=255) ccgatccccaccgagcgcataccgctggcgttaatggcgtcaatgcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGc > 1:246449‑M1/89‑101 (MQ=255) gatccccaccgagcgcataccgctggcgttaatggcgtcaatgcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGcac > 2:916709‑M1/87‑101 (MQ=255) atccccaccgagcgcataccgctggcgttaatggcgtcaatgcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGcaca > 2:477893‑M1/86‑101 (MQ=255) cgcataccgctggcgttaatggcgtcaatgcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGaaa > 2:631885‑M1/74‑101 (MQ=255) ttaccgctggcgttaatggcgtcaatgcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGAt > 1:1638490‑M1/71‑101 (MQ=255) ataccgctggcgttaatggcgtcaatgcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGAt > 2:1590643‑M1/71‑101 (MQ=255) ataccgctggcgttaatggcgtcaatgcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGAt < 1:735434‑M1/31‑1 (MQ=255) gctggcgttaatggcgtcaatgcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGACCTGCACAGGCGGCGAGAAAGATTTCCg < 2:964087‑M1/36‑1 (MQ=255) ggcgttaatggcgtcaatgcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGt > 2:731951‑M1/63‑101 (MQ=255) cgttaatggcgtcaatgcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTcc > 1:1536683‑M1/61‑101 (MQ=255) cgttaatggcgtcaatgcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCCAGAAAGATTtccggggcc < 2:1655711‑M1/41‑4 (MQ=255) cgttaatggcgtcaatgcccgcctgcgcatcttcaatgccgatacatgcctgcagcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTcc > 2:1718623‑M1/61‑101 (MQ=255) gttaatggcgtcaatgcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCg > 1:1351143‑M1/60‑101 (MQ=255) ttaatggcgtcaatgcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCgg > 1:833505‑M1/59‑101 (MQ=255) aatggcgtcaatgcccgcctgcgcatcttcaatgccgatacatgcctgcggcgggaCGCCCAGCCCTGCACAGGCGGCGAGAAAGAATTCCCGGTccgggt < 2:1590056‑M1/45‑3 (MQ=255) aatggcgtcaatgcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGtt > 2:1313131‑M1/57‑101 (MQ=255) cgtcaatgcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAg > 2:365584‑M1/52‑101 (MQ=255) caatgcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGGGAAAGATTTCCGGGTCCGGCTTCGAGttt < 1:285191‑M1/53‑1 (MQ=255) tgcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTa > 1:1695247‑M1/46‑101 (MQ=255) gccggcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCATAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTaa > 1:868496‑M1/45‑101 (MQ=255) gcccgcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTaa > 2:3999‑M1/45‑101 (MQ=255) gcctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTg > 1:257123‑M1/41‑101 (MQ=255) ctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTggg < 2:549337‑M1/63‑1 (MQ=255) ctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTggg < 1:1563563‑M1/63‑1 (MQ=255) ctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTggg < 2:283659‑M1/63‑1 (MQ=255) ctgcgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTggg > 1:687452‑M1/39‑101 (MQ=255) cgcatcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTGGGAAg > 1:922764‑M1/36‑101 (MQ=255) gcatcttcaatgccgatacatgcctgcggcggcaCGCCCATCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTGGGAAGc > 1:1448832‑M1/35‑101 (MQ=255) atcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGCAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTGGGAAGCAt < 1:801495‑M1/69‑1 (MQ=255) atcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTGGGAAGCAt < 2:642127‑M1/69‑1 (MQ=255) atcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTGGGAAGCAt > 1:161658‑M1/33‑101 (MQ=255) atcttcaatgccgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTGGGAAGCAt < 2:1285468‑M1/69‑1 (MQ=255) cgatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTGGGAAGCATCCGCGCAGAAg > 2:149340‑M1/22‑101 (MQ=255) gatacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTGGGAAGCATCCGCGCAGAAgg > 1:156899‑M1/21‑101 (MQ=255) atacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTGGGAAGCATCCGCGCAGAAGGt > 1:388565‑M1/20‑101 (MQ=255) atacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTGGGAAGCATCCGCGCAGAAGGt < 1:658928‑M1/82‑1 (MQ=255) tacatgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTGGGAAGCATCCGCGCAGAAGGTg > 1:546644‑M1/19‑101 (MQ=255) catgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTGGGAAGCATCCGCGCAGAAGGTGaa > 2:945616‑M1/17‑101 (MQ=255) atgcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTGGGAAGCATCCGCGCAGAAGGTGaaa < 2:386666‑M1/86‑1 (MQ=255) gcctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTGGGAAGCATCCGCGCAGAAGGTGaaaaa > 2:801490‑M1/14‑101 (MQ=255) ctgcggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTGGGAAGCATCCGCGCAGAAGGTGAAAAACt < 2:917688‑M1/90‑1 (MQ=255) ggcggcaCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTGGGAAGCATCCGCGCAGAAGGTGAAAAACTcgcg < 1:462147‑M1/94‑1 (MQ=255) caCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTGGGAAGCATCCGCGCAGAAGGTGAAAAACTCGCGCAGCt < 2:1613881‑M1/99‑1 (MQ=255) aCGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGATGGGAAGCATCCGCGCAGAAGGTGAAAAACTCGCGCAGCTc < 1:1544661‑M1/100‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCCCAGCCCTGCACAGGCGGCGAGAAAGATTTCCGGGTCCGGTTTCGAGTTTTTAAGTTGGGAAGCATCCGCGCAGAAGGTGAAAAACTCGCGCAGCTC > 25/1‑100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |