| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 2 | = 103027 | 0 (0.000) | 31 (0.530) | 16/174 | 2.8 | 51.7% | intergenic (–/–) | –/– | –/– |
| ? | 66 | 13336 = | 58 (1.000) | intergenic (–/–) | –/– | –/– | |||||
CCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 2/102928‑103027 | ccGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTa < 1:1531342‑M1/101‑2 (MQ=255) gcgTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTatg < 1:834833‑M1/101‑4 (MQ=255) gtgtGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTatgcc > 1:21311‑M1/1‑96 (MQ=255) ggTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTatgccggat < 1:1447291‑M1/101‑10 (MQ=255) gTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatg > 1:1659611‑M1/1‑91 (MQ=255) cACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcg < 2:590136‑M1/101‑13 (MQ=255) aCGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcgg > 2:1454561‑M1/1‑88 (MQ=255) aaTTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcct > 2:1419381‑M1/1‑67 (MQ=255) cctgcctgATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaa > 1:1478274‑M1/1‑63 (MQ=255) tgcctgATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaa > 1:207963‑M1/1‑61 (MQ=255) tgcctgATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaa < 2:935311‑M1/101‑41 (MQ=255) tgATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaactgt < 1:1258578‑M1/101‑45 (MQ=255) aTGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaactgtgc > 2:1487063‑M1/1‑55 (MQ=255) tGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaactgtgca > 1:589272‑M1/1‑54 (MQ=255) tGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaactgtgca > 2:211124‑M1/1‑54 (MQ=255) gggAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaactgtgcaa > 1:1527778‑M1/1‑53 (MQ=255) gAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaactgtgcaaat < 2:621611‑M1/101‑51 (MQ=255) aTTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaactgtgcaaattcaatatattg < 1:1239307‑M1/101‑62 (MQ=255) cgccgcCTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaactgtgcaaattcaatatattgcagg > 2:1574868‑M1/1‑36 (MQ=255) cgccTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaactgtgcaaattcaatatattgcaggaaa < 2:456530‑M1/101‑69 (MQ=255) cgccTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaactgtgcaaattcaatatattgcaggaaa < 1:320273‑M1/101‑69 (MQ=255) gccTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaactgtgcaaattcaatatattgcaggaaac < 2:928787‑M1/101‑70 (MQ=255) gccTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaactgtgcaaattcaatatattgcaggaaac > 2:253517‑M1/1‑32 (MQ=255) gccTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaactgtgcaaattcaatatattgcaggaaac < 1:417423‑M1/101‑70 (MQ=255) ccTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaactgtgcaaattcaatatattgcaggaaaca < 2:363078‑M1/101‑71 (MQ=255) cTCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaactgtgcaaattcaatatattgcaggaaacac > 2:123908‑M1/1‑30 (MQ=255) tCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaactgtgcaaattcaatatattgcaggaaacacg > 2:990553‑M1/1‑29 (MQ=255) tCAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaactgtgcaaattcaatatattgcaggaaacacg < 1:400218‑M1/101‑73 (MQ=255) cAAATGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaactgtgcaaattcaatatattgcaggaaacacgt < 2:589267‑M1/101‑74 (MQ=255) aaaTGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaactgtgcaaattcaatatattgcaggaaacacgta > 1:1191876‑M1/1‑27 (MQ=255) aaaTGATTTACATAGTGCGCTTTGTTTatgccggatgcggcgtgaacgccttatccggcctacaaaactgtgcaaattcaatatattgcaggaaacacgta < 1:898334‑M1/101‑75 (MQ=255) gcgcTTTGTTTatgccggatgcggcgagaacgccttatccggccaacaaaacatcgaaaattcaatatattgcaggagaaagtaggcatgataagcgtagc < 2:1040999‑M1/101‑91 (MQ=255) ttGTTTatgccggatgcggcgagaacgccttatccggcctacaaaacatcgaaaattcaatatattgcaggagaaagtaggcctgataagcgtagcgcatc > 2:1289139‑M1/1‑6 (MQ=255) ttatgccggatgcggcgagaacgccttatccggcctacaaaacatcgaaaattcaatatattgcaggagaaagtaggcctgataagcgtagcgcatcaggc < 2:949930‑M1/101‑100 (MQ=255) tatgccggatgcggcgagaacgccttatccggcctacaaaacatcgaaaattcaatatattgcaggagaaagtaggcctgataagcgtagcgcatcaggca < 2:226732‑M1/101‑101 (MQ=255) | CCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGATGGGAGGCGGCGCAATTGCGCCGCCTCAAATGATTTACATAGTGCGCTTTGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 2/102928‑103027 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |