New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 199 | = 4737 | 0 (0.000) | 20 (0.300) | 18/200 | 3.0 | 32.3% | intergenic (–/–) | –/– | –/– |
? | 66 | = 13440 | 84 (1.260) | intergenic (–/–) | –/– | –/– |
GTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 199/4641‑4737 | gTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaa < 1:1703666‑M1/101‑5 (MQ=255) gTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaa < 1:981064‑M1/101‑5 (MQ=255) gcATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcct > 1:906633‑M1/1‑91 (MQ=255) cATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctg < 2:1497973‑M1/101‑12 (MQ=255) aTGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctga > 2:702331‑M1/1‑89 (MQ=255) tGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgat < 1:404654‑M1/101‑14 (MQ=255) tACGTGGCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGTCTGAAAGTCACTAaaaattgcctgatgcgct < 2:1698567‑M1/101‑19 (MQ=255) cGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctac < 1:392602‑M1/101‑21 (MQ=255) cGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctac > 1:303873‑M1/1‑81 (MQ=255) gTACCAGAGCCGGAGAAAATTGAGGCGGGGGTCAAGATTCTGGCGGAAGATATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacg < 1:535833‑M1/101‑22 (MQ=255) ccAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacgctt < 2:999906‑M1/101‑25 (MQ=255) cAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacgctta < 2:1593916‑M1/101‑26 (MQ=255) agagCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacgcttat < 1:1383407‑M1/101‑27 (MQ=255) agagCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacgcttat < 1:94435‑M1/101‑27 (MQ=255) agagCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacgcttat > 2:1626967‑M1/1‑75 (MQ=255) gagCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacgcttatc > 2:1527807‑M1/1‑74 (MQ=255) gagCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacgcttatc < 2:788036‑M1/101‑28 (MQ=255) gCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacgcttatcag < 1:702336‑M1/101‑30 (MQ=255) ggAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacgcttatcaggcc < 2:1009866‑M1/101‑33 (MQ=255) gagaAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacgcttatcaggcct < 2:1678779‑M1/101‑34 (MQ=255) | GTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 199/4641‑4737 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |