New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 199 = 47370 (0.000)20 (0.300) 18/200 3.0 32.3% intergenic (–/–) –/– –/–
?66 = 13440 84 (1.260)intergenic (–/–) –/– –/–

GTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  199/4641‑4737
                                                                                                |                                 
gTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaa                               <  1:1703666‑M1/101‑5 (MQ=255)
gTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaa                               <  1:981064‑M1/101‑5 (MQ=255)
      gcATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcct                         >  1:906633‑M1/1‑91 (MQ=255)
       cATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctg                        <  2:1497973‑M1/101‑12 (MQ=255)
        aTGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctga                       >  2:702331‑M1/1‑89 (MQ=255)
         tGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgat                      <  1:404654‑M1/101‑14 (MQ=255)
              tACGTGGCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGTCTGAAAGTCACTAaaaattgcctgatgcgct                 <  2:1698567‑M1/101‑19 (MQ=255)
                cGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctac               <  1:392602‑M1/101‑21 (MQ=255)
                cGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctac               >  1:303873‑M1/1‑81 (MQ=255)
                 gTACCAGAGCCGGAGAAAATTGAGGCGGGGGTCAAGATTCTGGCGGAAGATATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacg              <  1:535833‑M1/101‑22 (MQ=255)
                    ccAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacgctt           <  2:999906‑M1/101‑25 (MQ=255)
                     cAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacgctta          <  2:1593916‑M1/101‑26 (MQ=255)
                      agagCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacgcttat         <  1:1383407‑M1/101‑27 (MQ=255)
                      agagCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacgcttat         <  1:94435‑M1/101‑27 (MQ=255)
                      agagCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacgcttat         >  2:1626967‑M1/1‑75 (MQ=255)
                       gagCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacgcttatc        >  2:1527807‑M1/1‑74 (MQ=255)
                       gagCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacgcttatc        <  2:788036‑M1/101‑28 (MQ=255)
                         gCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacgcttatcag      <  1:702336‑M1/101‑30 (MQ=255)
                            ggAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacgcttatcaggcc   <  2:1009866‑M1/101‑33 (MQ=255)
                             gagaAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAaaaattgcctgatgcgctacgcttatcaggcct  <  2:1678779‑M1/101‑34 (MQ=255)
                                                                                                |                                 
GTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  199/4641‑4737

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.