New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 197 | = 5170 | 0 (0.000) | 61 (1.130) +GTAGGCCGGATAAGGCGCT |
51/162 | 0.1 | 100% | intergenic (–/–) | –/– | –/– |
? | 55 | = 27005 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
AAGAAAGGCGAGTTTGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 197/5070‑5170 | aaGAAAGGCGAGTTTGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCttt > 1:411251/1‑101 (MQ=255) aaGGCGAGTTTGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtag < 2:1146378‑M1/101‑5 (MQ=255) aGGCGAGTTTGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtagg < 2:653424‑M1/101‑6 (MQ=255) ggCGAGTTTGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggc > 2:313796‑M1/1‑95 (MQ=255) cGAGTTTGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccg > 1:278284‑M1/1‑93 (MQ=255) aGTTTGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccgga < 1:960637‑M1/101‑11 (MQ=255) gTTTGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggat < 1:1388538‑M1/101‑12 (MQ=255) gTTTGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggat > 1:1084821‑M1/1‑90 (MQ=255) ttGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataa < 1:1150486‑M1/101‑14 (MQ=255) ttGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataa > 2:332229‑M1/1‑88 (MQ=255) tGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataag < 1:1231521‑M1/101‑15 (MQ=255) gAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataagg < 2:895874‑M1/101‑16 (MQ=255) aGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggc > 2:483423‑M1/1‑85 (MQ=255) aGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggc < 1:1588988‑M1/101‑17 (MQ=255) cTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcg > 1:435924‑M1/1‑80 (MQ=255) tGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgc > 1:1428285‑M1/1‑79 (MQ=255) tGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgc < 1:1316329‑M1/101‑23 (MQ=255) gTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcg > 2:430744‑M1/1‑78 (MQ=255) gTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcg > 2:658944‑M1/1‑78 (MQ=255) gCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgca < 2:79005‑M1/101‑29 (MQ=255) ttttGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatc > 2:771007‑M1/1‑71 (MQ=255) ttttGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatc > 1:929709‑M1/1‑71 (MQ=255) tttGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatcc > 2:531944‑M1/1‑70 (MQ=255) gTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggcctgataaggcgcccgggccgcatccggc < 2:1341906‑M1/101‑35 (MQ=255) tAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgacccgcatccggca > 2:1667334‑M1/1‑66 (MQ=255) aaGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcag > 1:220201‑M1/1‑65 (MQ=255) cgcgACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaac < 1:738894‑M1/101‑42 (MQ=255) gcgACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacg > 1:614446‑M1/1‑59 (MQ=255) gcgACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacg < 1:212882‑M1/101‑43 (MQ=255) gACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgcc > 1:1429013‑M1/1‑57 (MQ=255) aCGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccg < 1:1011682‑M1/101‑46 (MQ=255) tttGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggac > 2:61836‑M1/1‑53 (MQ=255) tGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccg > 2:355114‑M1/1‑51 (MQ=255) gcgcCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccga > 1:999787‑M1/1‑50 (MQ=255) cgcCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaa > 2:707637‑M1/1‑49 (MQ=255) gcCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCTTTTgtaggcgggataaggctctcgccccgcctccggcaggaaacgccggaccgaat < 2:1294802‑M1/101‑54 (MQ=255) gcCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaat > 1:1217690‑M1/1‑48 (MQ=255) cccTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaata > 1:1308053‑M1/1‑47 (MQ=255) ccTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatat < 1:1705224‑M1/101‑56 (MQ=255) ccTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatat < 2:1053305‑M1/101‑56 (MQ=255) ttGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcc > 1:289627‑M1/1‑43 (MQ=255) tGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcct > 1:904126‑M1/1‑42 (MQ=255) tGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcct > 2:800823‑M1/1‑42 (MQ=255) tGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcct > 1:1340235‑M1/1‑42 (MQ=255) tGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcct < 2:1341344‑M1/101‑60 (MQ=255) tcctGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctc < 1:410816‑M1/100‑61 (MQ=255) ccTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctct > 1:655047‑M1/1‑40 (MQ=255) gATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaa > 2:132114‑M1/1‑37 (MQ=255) gATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaa < 1:1616735‑M1/101‑65 (MQ=255) gATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaa < 2:352028‑M1/101‑65 (MQ=255) gATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaa < 2:278284‑M1/101‑65 (MQ=255) aTGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaag > 2:994518‑M1/1‑36 (MQ=255) aTGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaag > 2:1282078‑M1/1‑36 (MQ=255) tGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagt > 2:534692‑M1/1‑35 (MQ=255) ttCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtat > 2:821462‑M1/1‑33 (MQ=255) tCATATTTTAACTTGCTGATTTTTCGCCCTTTggaggccggataaggcgctcgccccccatcgggcaggaaacgccggaccgaatatgcctcttaagtatt < 1:326996‑M1/101‑70 (MQ=255) tCATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatt > 2:374451‑M1/1‑32 (MQ=255) cATATCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtattt > 1:358816‑M1/1‑31 (MQ=255) tatCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttat > 2:1052678‑M1/1‑29 (MQ=255) atCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatc < 1:719823‑M1/101‑74 (MQ=255) tCTTAACTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatct > 2:701807‑M1/1‑27 (MQ=255) cTTGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattct > 2:622693‑M1/1‑21 (MQ=255) ttGCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcacccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctg < 2:1492704‑M1/101‑82 (MQ=255) gCTGAATTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgca > 1:822244‑M1/1‑18 (MQ=255) tGATTTTTCGCCCTTTgtaggcgggatagggcgctcgcgccgcacccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaac < 2:857226‑M1/101‑86 (MQ=255) aaTTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccaaatatgcctcttaagtatttatctgattctgcaactg < 2:213221‑M1/101‑88 (MQ=255) aTTTTCGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactga > 1:692495‑M1/1‑13 (MQ=255) cGCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactgaatcct > 1:1365429‑M1/1‑8 (MQ=255) gCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactgaatcctt < 1:1622341‑M1/101‑95 (MQ=255) gCCCTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactgaatcctt > 1:217283‑M1/1‑7 (MQ=255) ccttttgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactgaatccttc < 2:636288‑M1/98‑96 (MQ=255) cccTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactgaatccttc < 2:497999‑M1/101‑96 (MQ=255) cccttgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactgaatccttcc > 1:1428066‑M1/4‑5 (MQ=255) ccTTTgtaggccggataaggcgctcgcgccgcacccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactgaatccttcc < 1:652700‑M1/101‑97 (MQ=255) cTTTgtaggccggataaggcgctcgcgccgcatccggcaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactgaatccttccg > 2:1177845‑M1/1‑4 (MQ=255) | AAGAAAGGCGAGTTTGAGTTGCTGTAATGCTTTTGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 197/5070‑5170 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |