| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 19 | = 43912 | 0 (0.000) | 67 (1.210) | 51/166 | 0.1 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 40 | = 30782 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GAGTTTATGCCCATCCCTCTCCCCAGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 19/43812‑43912 | gAGTTTATGCCCATCCCTCTCCCCAGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTAT > 2:1318660‑M1/1‑101 (MQ=255) aGTTTATGCCCATCCCTCTCCCCAGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATg < 1:814736‑M1/101‑2 (MQ=255) gTTTATGCCCATCCCTCTCCCCAGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATga > 2:412098‑M1/1‑99 (MQ=255) gTTTATGCCCATCCCTCTCCCCAGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATga > 2:124296‑M1/1‑99 (MQ=255) ttATGCCCATCCCTCTCCCCAGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgaca < 2:349073‑M1/101‑5 (MQ=255) tccgatctcctctccccaGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgc < 1:290399‑M1/93‑8 (MQ=255) gCCCATCCCTCTCCCCAGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcg < 1:956724‑M1/101‑9 (MQ=255) cccATCCCTCTCCCCAGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgc > 1:791217‑M1/1‑92 (MQ=255) ccATCCCTCTCCCCAGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgca > 1:579757‑M1/1‑91 (MQ=255) ccATCCCTCTCCCCAGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgca < 1:883711‑M1/101‑11 (MQ=255) cATCCCTCTCCCCAGAAAACGTTGTGGATAGGTCAGGCGGATAAGGGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaa > 2:1609236‑M1/1‑90 (MQ=255) cATCCCTCTCCCCAGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaa > 2:879796‑M1/1‑90 (MQ=255) aTCCCTCTCCCCAGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaag > 1:656044‑M1/1‑89 (MQ=255) cccTCGCCCCAGAAATCGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCGCATCAACGCTGCGCCGCCGAAACCTTGTATgacacgcgcaaggg < 1:526455‑M1/101‑15 (MQ=255) ccTCTCCCCAGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcagatcgga > 2:290399‑M1/1‑86 (MQ=255) ctctCCCCAGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtg > 1:1551747‑M1/1‑85 (MQ=255) cccAGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcat < 2:579752‑M1/101‑22 (MQ=255) cccAGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcat < 1:1176047‑M1/101‑22 (MQ=255) ccAGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatt > 2:1196000‑M1/1‑79 (MQ=255) cAGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcattt > 2:1280247‑M1/1‑78 (MQ=255) aGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttg < 2:637290‑M1/101‑25 (MQ=255) gAAAACGTTGTGGATAGATCAGGCGGATAAGGGCGGTATTAACGCTCATCAACGCTGCACCACCGAAACCTTGTATgacacgcgcaagggtgagcatttgc > 1:539156‑M1/1‑76 (MQ=255) aaaCGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcag > 1:1056951‑M1/1‑74 (MQ=255) tgtgGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatc > 1:1027889‑M1/1‑68 (MQ=255) gtgGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatca < 2:325069‑M1/101‑35 (MQ=255) tgGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcag < 2:190727‑M1/101‑36 (MQ=255) ggATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcaga > 2:502446‑M1/1‑65 (MQ=255) ggATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcaga > 1:987476‑M1/1‑65 (MQ=255) gATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaa < 1:45042‑M1/101‑38 (MQ=255) aTAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaa > 2:350822‑M1/1‑63 (MQ=255) aTAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaa < 1:1324959‑M1/101‑39 (MQ=255) tAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaag < 2:656039‑M1/101‑40 (MQ=255) aGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagg < 2:707811‑M1/101‑41 (MQ=255) aGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagg < 1:1620930‑M1/101‑41 (MQ=255) gATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaaggg < 1:1579181‑M1/101‑42 (MQ=255) aTCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggc < 1:429784‑M1/101‑43 (MQ=255) tCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcg < 1:1028366‑M1/101‑44 (MQ=255) ggCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcag < 1:879801‑M1/101‑47 (MQ=255) ggCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcag < 1:773004‑M1/101‑47 (MQ=255) cGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaa < 2:526224‑M1/101‑49 (MQ=255) ggATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaac < 2:1608613‑M1/101‑50 (MQ=255) ggATAAGTGCAGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaac < 1:1341623‑M1/101‑50 (MQ=255) aTAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacag > 1:860283‑M1/1‑50 (MQ=255) tAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagt < 1:1569983‑M1/101‑53 (MQ=255) aaagTGAGGTATAAACACTCATCAACGCTCCACCGCAGAACCCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagt < 2:884053‑M1/100‑53 (MQ=255) aaGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtg < 1:1609242‑M1/101‑54 (MQ=255) aaGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtg > 1:58501‑M1/1‑48 (MQ=255) aaGTGCGGTATTAACGCTCATCAACGCTGCACCACCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtg > 1:241924‑M1/1‑48 (MQ=255) gCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaaga > 2:976368‑M1/1‑44 (MQ=255) gCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaaga < 1:1163894‑M1/101‑58 (MQ=255) gTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATtacacgcgcaagggtgagcatttgcagcgaatcagaaagggagcagaacagtgaggacaa > 2:1637934‑M1/1‑41 (MQ=255) gTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaa > 2:831088‑M1/1‑41 (MQ=255) gTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaa > 2:1367563‑M1/1‑41 (MQ=255) aTTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagcgaagacaaca > 1:1515800‑M1/1‑39 (MQ=255) aTTAACGCTCATCAACGCTGCACCGCCGAAACCTTGCATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaaca > 2:1607927‑M1/1‑39 (MQ=255) tAACGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacaga > 2:691418‑M1/1‑37 (MQ=255) aaCGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcggaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaa < 1:1318169‑M1/101‑66 (MQ=255) aaCGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaa > 1:1118183‑M1/1‑36 (MQ=255) aaCGCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaa < 2:163539‑M1/101‑66 (MQ=255) gCTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaa < 2:1061543‑M1/101‑69 (MQ=255) cTCATCAACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaac < 2:1361390‑M1/101‑70 (MQ=255) tcatcaACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacg > 2:1668148‑M1/1‑31 (MQ=255) caACGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgacca > 2:1264390‑M1/1‑27 (MQ=255) aaCGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgaccag < 2:825387‑M1/101‑76 (MQ=255) aaCGCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgaccag < 1:1196005‑M1/101‑76 (MQ=255) gCTGCACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgaccagacc > 1:585933‑M1/1‑23 (MQ=255) cACCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgaccagaccgcat > 2:1156140‑M1/1‑19 (MQ=255) aCCGCCGAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgaccagaccgcatt > 1:884183‑M1/1‑18 (MQ=255) gccgAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgaccagaccgcatttat < 2:584471‑M1/101‑87 (MQ=255) gccgAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgaagaacagtgaagacaacagaaagacgaccagaccgcatttat < 2:1044542‑M1/101‑87 (MQ=255) ccgAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgaccagaccgcatttata > 1:366304‑M1/1‑14 (MQ=255) cgAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgaccagaccgcatttataa < 2:192860‑M1/101‑89 (MQ=255) cgAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgaccagaccgcatttataa < 2:1281013‑M1/101‑89 (MQ=255) gAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgaccagaccgcatttataaa > 2:1212267‑M1/1‑12 (MQ=255) gAAACCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgaccagaccgcatttataaa > 2:578124‑M1/1‑12 (MQ=255) aaCCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgaccagaccgcatttataaata > 2:730335‑M1/1‑10 (MQ=255) aaCCTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgaccagaccgcatttataaata > 1:758573‑M1/1‑10 (MQ=255) ccTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgaccagaccgcatttataaatacg < 1:942892‑M1/101‑94 (MQ=255) cTTGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgaccagaccgcatttataaatacgt > 2:237446‑M1/1‑7 (MQ=255) tGTATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgaccagaccgcatttataaatacgtcg < 2:629829‑M1/101‑97 (MQ=255) tATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgaccagaccgcatttataaatacgtcgat < 1:1495224‑M1/101‑99 (MQ=255) tATgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgaccagaccgcatttataaatacgtcgat < 1:691423‑M1/101‑99 (MQ=255) aTgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaatagaaaaacgaccagaccgcatttataaatacgtcgata < 1:544127‑M1/101‑100 (MQ=255) tgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgaccagaccgcatttataaatacgtcgatag > 1:736786‑M1/1‑1 (MQ=255) tgacacgcgcaagggtgagcatttgcagcgaatcagaaagggcgcagaacagtgaagacaacagaaaaacgaccagaccgcatttataaatacgtcgatag < 2:1054811‑M1/101‑101 (MQ=255) | GAGTTTATGCCCATCCCTCTCCCCAGAAAACGTTGTGGATAGATCAGGCGGATAAGTGCGGTATTAACGCTCATCAACGCTGCACCGCCGAAACCTTGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 19/43812‑43912 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |