| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 189 | 1 = | 0 (0.000) | 45 (0.680) | 36/198 | 0.6 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 207 | = 3728 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAGAATTTAACCCTGCTACGTGATATCGAATTG > 189/1‑101 | ctgcagaactggccgaaagttatgccgtacttgagcagcgggttcaggagaaaaccgccgggctggagcataaaaatcagatcctctcttttttatggcAg > 2:821633‑M1/100‑101 (MQ=255)ctgcagaactggccgaaagttatgccgtacttgagcagcgggttcaggagaaaaccgccgggctggagcataaaaatcagatcctctcttttttatggcAg < 1:1365823‑M1/2‑1 (MQ=255) tgcagaactggccgaaagttatgccgtacttgagcagcgggttcaggagaaaaccgccgggctggagcataaaaatcagatcctctcttttttatggcAgg > 1:520854‑M1/99‑101 (MQ=255) tgcagaactggccgaaagttatgccgtacttgagcagcgggttcaggagaaaaccgccgggctggagcataaaaatcagatcctctcttttttatggcAgg > 2:1525625‑M1/99‑101 (MQ=255) agaactggccgaaagttatgccgtacttgagcagcgggttcaggagaaaaccgccgggctggagcataaaaatcagatcctctcttttttatggcAGGCTa < 1:1439599‑M1/6‑1 (MQ=255) gaaagttatgccgtacttgagcagcgggttcaggagaaaaccgccgggctggagcataaaaatcagatcctctcttttttatggcAGGCtaaacgccgctt < 1:191697‑M1/16‑4 (MQ=255) gaaagttatgccgtacttgagcagcgggttcaggagaaaaccgccgggctggagcataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGttt < 2:12936‑M1/16‑1 (MQ=255) gaaagttatgccgtacttgagcagcgggttcaggagaaaaccgccgggctggagcataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGttt > 2:228936‑M1/86‑101 (MQ=255) gttatgccgtacttgagcagcgggttcaggagaaaaccgccgggctggagcataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCAt > 1:796327‑M1/82‑101 (MQ=255) tatgccgtacttgagcagcgggttcaggagaaaaccgccgggctggagcataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTc < 1:1340058‑M1/22‑1 (MQ=255) ccgtacttgagcagcgggttcaggagaaaaccgccgggctggagcataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCcgc < 1:1341798‑M1/26‑1 (MQ=255) gtacttgagcagcgggttcaggagaaaaccgccgggctggagcataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCgcgc < 1:1242088‑M1/28‑1 (MQ=255) gagcagcgggttcaggagaaaaccgccgggctggagcataaaaatcagatcctctcttttttatggcAGGCTAAACCCCCTTTGCATTCCCGCGCCCCgcc < 2:869757‑M1/34‑2 (MQ=255) cagcgggttcaggagaaaaccgccgggctggagcataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCtgtg > 2:591855‑M1/65‑101 (MQ=255) cagcgggttcaggagaaaaccgccgggctggagcataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCtgtg > 2:1242083‑M1/65‑101 (MQ=255) ggttcaggagaaacccgccgggctggagcataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAAc > 1:18527‑M1/60‑101 (MQ=255) ggttcaggagaaaaccgccgggctggagcataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAAc > 2:1238757‑M1/60‑101 (MQ=255) ggttcaggagaaaaccgccgggctggagcataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAAc > 1:485367‑M1/60‑101 (MQ=255) caggagaaaaccgccgggctggagcataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCCGTGTGAACGCCt < 1:1022259‑M1/46‑1 (MQ=255) aaaaccgccgggctggagcataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCAcc > 2:1365817‑M1/50‑101 (MQ=255) aaaaccgccgggctggagcataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCAcc > 2:1294883‑M1/50‑101 (MQ=255) ccgccgggctggagcataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCGGTGTGAACGCCCGTTacctcgc < 2:45304‑M1/56‑4 (MQ=255) cgggctggagcataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCa > 1:168300‑M1/42‑101 (MQ=255) ggctggagcataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAAc > 1:1160218‑M1/40‑101 (MQ=255) ctggagcataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACgg < 1:444328‑M1/64‑1 (MQ=255) gagcataaaaatcagatcctctcttttttagggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCtt > 2:161688‑M1/35‑101 (MQ=255) cataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACa > 1:517261‑M1/32‑101 (MQ=255) cataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACa > 1:917048‑M1/32‑101 (MQ=255) ataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAg < 1:79296‑M1/71‑1 (MQ=255) ataaaaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAg < 2:1361560‑M1/71‑1 (MQ=255) taaaaatcagatcctctcttttttatggcAGGCGAACCGCCGTTTGCATTTCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAGa < 2:1190842‑M1/72‑1 (MQ=255) aaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAGAAtt > 1:1687899‑M1/27‑101 (MQ=255) aaatcagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCCCGCCCCGCTGTGTGAACGCCTTTCACCTGTACTCAACGGCTTACAGAAtt < 2:257871‑M1/75‑1 (MQ=255) cagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAGAATTTAAc > 2:361751‑M1/23‑101 (MQ=255) cagatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAGAATTTAAc > 1:1292556‑M1/23‑101 (MQ=255) agatcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCCCGCCCCGCTGTGTGGACGCCTGTCACCTGTACTCAACGGCTTACAGAATTTAAcc < 1:1338517‑M1/80‑1 (MQ=255) atcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAGAATTTAACCCt < 1:213161‑M1/82‑1 (MQ=255) tcctctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAGAATTTAACCCTg < 1:1404446‑M1/83‑1 (MQ=255) tctcttttttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAGAATTTAACCCTGCTa < 1:1570161‑M1/86‑1 (MQ=255) ttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTGCTCAACGGCTTACAGAATTTAACCCTGCTACGTGatat > 1:1072529‑M1/8‑101 (MQ=255) ttatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAGAATTTAACCCTGCTACGTGatat < 1:1154864‑M1/94‑1 (MQ=255) tatggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAGAATTTAACCCTGCTACGTGATATc > 2:1340052‑M1/7‑101 (MQ=255) ggcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAGAATTTAACCCTGCTACGTGATATCGaa < 2:1000209‑M1/98‑1 (MQ=255) gcAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAGAATTTAACCCTGCTACGTGATATCGAAt < 1:102056‑M1/99‑1 (MQ=255) cAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAGAATTTAACCCTGCTACGTGATATCGAAtt > 1:1609235‑M1/2‑101 (MQ=255) AGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAGAATTTAACCCTGCTACGTGATATCGAATTg < 1:637301‑M1/101‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAGAATTTAACCCTGCTACGTGATATCGAATTG > 189/1‑101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |