| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 187 | = 5305 | 1 (0.020) | 63 (0.950) | 52/200 | 0.2 | 99.2% | intergenic (–/–) | –/– | –/– |
| ? | 222 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GTGCGGCGTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGCGATGATAATGATGGCCCCAAGATCGTCGATAATAGCCAGAGCCATCAAAAAGATCTTCAGCGCTAACGGAACACGACTTCCCAACAGCGCCAGCAC > 187/5206‑5402 | gTGCGGCGTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGt < 1:1549172‑M1/101‑2 (MQ=255)gTGCGGCGTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGt < 2:1086007‑M1/101‑2 (MQ=255) tGCGGCGTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtg < 2:241050‑M1/101‑3 (MQ=255) cggcgTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgta > 2:441986‑M1/1‑97 (MQ=255) cgTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactg < 1:1525178‑M1/101‑8 (MQ=255) gTACACCACACAGATTCAATACGGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgc > 2:149515‑M1/1‑93 (MQ=255) gTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgc > 1:118657‑M1/1‑93 (MQ=255) gTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgc > 1:162675‑M1/1‑93 (MQ=255) gTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgc > 1:1266783‑M1/1‑93 (MQ=255) cacacaGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccat > 2:777952‑M1/1‑87 (MQ=255) aGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgt < 1:100815‑M1/101‑20 (MQ=255) aGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgt < 2:235092‑M1/101‑20 (MQ=255) gATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgtt < 1:1459750‑M1/101‑21 (MQ=255) gATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgtt > 1:329078‑M1/1‑81 (MQ=255) gATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgtt > 2:115050‑M1/1‑81 (MQ=255) aTTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttg > 2:75362‑M1/1‑80 (MQ=255) ttCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttgg < 1:1693833‑M1/101‑23 (MQ=255) ttCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttgg < 1:134617‑M1/101‑23 (MQ=255) tCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttgga < 2:1201158‑M1/101‑24 (MQ=255) cAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggac < 1:842233‑M1/101‑25 (MQ=255) aaTACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacg > 1:609262‑M1/1‑76 (MQ=255) ccGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatga < 1:1613343‑M1/101‑30 (MQ=255) cgcgAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaa < 1:755394‑M1/101‑31 (MQ=255) cgAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaat > 1:1511919‑M1/1‑69 (MQ=255) aGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatgg < 2:459597‑M1/101‑35 (MQ=255) tACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGCGATGATAATGATGGCCCCAAGATCGTCGATAATAg < 1:1292609/101‑1 (MQ=255) ccGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaata < 2:1087174‑M1/101‑39 (MQ=255) ccGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaata < 1:743056‑M1/101‑39 (MQ=255) aaTTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGGCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagccc > 1:1328628‑M1/1‑59 (MQ=255) aTTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaataggccc > 2:508246‑M1/1‑58 (MQ=255) tGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagccccta < 1:1498444‑M1/101‑46 (MQ=255) aCAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat < 1:794869‑M1/101‑50 (MQ=255) aCAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat > 1:953173‑M1/1‑52 (MQ=255) gCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtc > 1:901431‑M1/1‑49 (MQ=255) ccGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtcctgcacccattttgttggacgattaaatggaatagcccctaatatgtca < 2:941921‑M1/101‑54 (MQ=255) ccGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca < 1:1134760‑M1/101‑54 (MQ=255) cgcgACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaa < 1:1071344‑M1/101‑55 (MQ=255) cgcgACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaa > 1:693827‑M1/1‑47 (MQ=255) gcgACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaa < 2:1677130‑M1/101‑56 (MQ=255) gCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaa < 2:1070101‑M1/101‑61 (MQ=255) gCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaa > 2:900321‑M1/1‑41 (MQ=255) aaGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaat < 1:777957‑M1/101‑64 (MQ=255) aaGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaat > 1:1288780‑M1/1‑38 (MQ=255) gagagGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatac < 1:212812‑M1/101‑66 (MQ=255) agagGCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacc > 2:1442967‑M1/1‑35 (MQ=255) ggCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctt < 2:610875‑M1/101‑70 (MQ=255) gCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttt < 2:1226944‑M1/101‑71 (MQ=255) gCCATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttt > 1:1473044‑M1/1‑31 (MQ=255) cATCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttg > 1:81202‑M1/1‑29 (MQ=255) aTCGATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga > 1:299299‑M1/1‑28 (MQ=255) gATAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaa > 1:1233818‑M1/1‑25 (MQ=255) aTAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaag < 1:1507034‑M1/101‑78 (MQ=255) tAAGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagc > 1:68445‑M1/1‑23 (MQ=255) aGTCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgc < 1:75362‑M1/101‑81 (MQ=255) tCATTAGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcct < 2:901426‑M1/101‑83 (MQ=255) aGTGTAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaag < 1:909551‑M1/101‑88 (MQ=255) tAGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgt > 2:1583413‑M1/1‑10 (MQ=255) aGAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtg > 2:653749‑M1/1‑9 (MQ=255) gAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtga < 2:1266778‑M1/101‑94 (MQ=255) gAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtga > 1:733313‑M1/1‑8 (MQ=255) gAACAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtga > 1:1594491‑M1/1‑8 (MQ=255) aaCAATGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaa > 1:1192606‑M1/1‑7 (MQ=255) aaTGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatca < 2:118657‑M1/101‑98 (MQ=255) aaTGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatca < 2:1374615‑M1/101‑98 (MQ=255) | GTGCGGCGTACACCACACAGATTCAATACCGCGAGTACCGCAATTGCTACAGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGCGATGATAATGATGGCCCCAAGATCGTCGATAATAGCCAGAGCCATCAAAAAGATCTTCAGCGCTAACGGAACACGACTTCCCAACAGCGCCAGCAC > 187/5206‑5402 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |