New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 186 | = 6614 | 0 (0.000) | 40 (0.650) | 27/186 | 2.5 | 72.7% | intergenic (–/–) | –/– | –/– |
? | 211 | 2681 = | 30 (0.480) | intergenic (–/–) | –/– | –/– |
TAATCTCATCAGCTACAGAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 186/6514‑6614 | tAATCTCATCAGCTACAGAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATAC < 2:1276658‑M1/101‑1 (MQ=255) tAATCTCATCAGCTACAGAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATAC < 1:250616‑M1/101‑1 (MQ=255) tAATCTCATCAGCTACAGAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATAC < 1:1391853‑M1/101‑1 (MQ=255) tctcATCAGCTACAGAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtga > 1:1180229‑M1/1‑98 (MQ=255) tctcATCAGCTACAGAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtga > 1:360727‑M1/1‑98 (MQ=255) tctcATCAGCTACAGAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtga < 2:1098007‑M1/101‑4 (MQ=255) nctcaTCAGCTACAGAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtga > 1:535656‑M1/2‑98 (MQ=255) ctcATCAGCTACAGAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgat > 1:293256‑M1/1‑97 (MQ=255) ctcATCAGCTACAGAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgat < 2:481873‑M1/101‑5 (MQ=255) ctcATCAGCTACAGAATGGATAAGATCACTTTCGGGGAATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgat > 1:1495217‑M1/1‑97 (MQ=255) catcaGCTACAGAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataa > 2:1329945‑M1/1‑95 (MQ=255) atcaGCTACAGAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCATGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaa > 1:714729‑M1/1‑94 (MQ=255) caGCTACAGAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaa > 2:1607850‑M1/1‑92 (MQ=255) gCTACAGAATTGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaatt < 1:931257‑M1/101‑12 (MQ=255) tACAGAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattcc < 1:150048‑M1/101‑14 (MQ=255) aCAGAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattcca > 1:970529‑M1/1‑87 (MQ=255) cAGAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccat < 2:774272‑M1/101‑16 (MQ=255) cAGAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccat < 2:525764‑M1/101‑16 (MQ=255) gAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatcc < 2:1677298‑M1/101‑18 (MQ=255) gAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatcc < 2:402900‑M1/101‑18 (MQ=255) gAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatcc > 1:92755‑M1/1‑84 (MQ=255) aaTGGATAAGATCACTTTCGGGGGATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatccc > 2:337186‑M1/1‑83 (MQ=255) aTGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatcccc < 1:1329951‑M1/101‑20 (MQ=255) tGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCGTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatccccc < 2:1434977‑M1/101‑21 (MQ=255) ggATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatcccccc < 1:306544‑M1/101‑22 (MQ=255) gATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatcccccct > 1:1558852‑M1/1‑79 (MQ=255) tAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatccccccttc > 2:748830‑M1/1‑77 (MQ=255) tAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatccccccttc > 1:1661983‑M1/1‑77 (MQ=255) gATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatccccccttcagc < 1:1223214‑M1/101‑28 (MQ=255) cACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatccccccttcagccca < 1:670661‑M1/101‑31 (MQ=255) aCTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatccccccttcagcccaa > 2:491235‑M1/1‑70 (MQ=255) tttCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatccccccttcagcccaatc < 2:116695‑M1/101‑34 (MQ=255) ggggTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatccccccttcagcccaatcggat < 2:1346733‑M1/101‑38 (MQ=255) ggggTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatccccccttcagcccaatcggat < 1:1557212‑M1/101‑38 (MQ=255) gggTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatccccccttcagcccaatcggatc < 2:1016725‑M1/101‑39 (MQ=255) gggTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatccccccttcagcccaatcggatc < 1:1562342‑M1/101‑39 (MQ=255) ggTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatccccccttcagcccaatcggatcc < 1:401661‑M1/101‑40 (MQ=255) gTATAAATTTATATCAACCAACCCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatccccccttcagcccaatcggatcct < 2:595178‑M1/101‑41 (MQ=255) ataAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatccccccttcagcccaatcggatcctga > 1:849301‑M1/1‑59 (MQ=255) aTTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatccccccttcagcccaatcggatcctgactga > 2:29972‑M1/1‑55 (MQ=255) tataTCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatccccccttcagcccaatcggatcctgactgatat < 2:376737‑M1/101‑50 (MQ=255) tataTCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatccccccttcagcccaatcggatcctgactgatat < 2:1495211‑M1/101‑50 (MQ=255) tataTCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATACtgataaaaattccatccccccttcagcccaatcggatcctgactgataa > 1:1690256‑M1/1‑52 (MQ=255) | TAATCTCATCAGCTACAGAATGGATAAGATCACTTTCGGGGTATAAATTTATATCAACCAAACCTTGCGGATCTACATTTATGACCGGATTCAACGGATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 186/6514‑6614 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |