| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 186 | 1 = | 0 (0.000) | 69 (1.050) +C |
60/198 | 0.3 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 42 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCCAGCAGTTCCAGCACTTCATCCACGCTG > 186/1‑97 | aggagaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgt > 2:1146664‑M1/101‑101 (MQ=255)aggagaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgt > 1:240488‑M1/101‑101 (MQ=255) ggagaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTa > 1:76869‑M1/100‑101 (MQ=255) gaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAgcg > 1:1360323‑M1/97‑101 (MQ=255) aggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAgcgc < 2:1631574‑M1/6‑1 (MQ=255) cagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAg < 1:830467‑M1/11‑1 (MQ=255) agcgccggatgcggcgtaagcgccttatccgtcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAgg > 1:449292‑M1/90‑101 (MQ=255) agccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCa > 1:269322‑M1/88‑101 (MQ=255) gccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCaa < 1:723868‑M1/15‑1 (MQ=255) ccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAAt > 1:42689‑M1/86‑101 (MQ=255) ccggatgcggcgtaagcgccttatccggcctacaagaacgggcaaattcaacaaattgtgatgtatcctgtaggcctgataagcgTAGCGCATCAGGCAAt < 1:52426‑M1/16‑1 (MQ=255) gcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAAccc > 1:213677‑M1/80‑101 (MQ=255) ggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCa > 1:1462759‑M1/78‑101 (MQ=255) taagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCtt > 2:1647875‑M1/74‑101 (MQ=255) taagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCtt < 1:1290258‑M1/28‑1 (MQ=255) agcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTtct > 2:343637‑M1/72‑101 (MQ=255) ccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCAt < 2:1524643‑M1/34‑1 (MQ=255) ttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCAtgt > 1:677785‑M1/66‑101 (MQ=255) tatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCAtgtg > 1:1075411‑M1/65‑101 (MQ=255) atccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTgg < 1:603751‑M1/38‑1 (MQ=255) cggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGgaga < 2:1571807‑M1/41‑1 (MQ=255) ggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGagag > 1:827355‑M1/60‑101 (MQ=255) gcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAgg > 2:245421‑M1/59‑101 (MQ=255) gcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAgg > 1:1648126‑M1/59‑101 (MQ=255) gcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAgg > 1:1214492‑M1/59‑101 (MQ=255) gcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAgg < 1:107083‑M1/43‑1 (MQ=255) cctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAggg < 2:1028824‑M1/44‑1 (MQ=255) cctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAggg > 1:632445‑M1/58‑101 (MQ=255) cctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAAACCCACCTTCTCCATGTGGAGAggg < 2:790544‑M1/44‑1 (MQ=255) ctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGagggg < 2:836727‑M1/45‑2 (MQ=255) ctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGt > 2:348881‑M1/57‑101 (MQ=255) aagaacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGGGgga < 2:429606‑M1/49‑1 (MQ=255) aacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGggattg < 1:1302567‑M1/52‑1 (MQ=255) aacgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGggattg > 1:548365‑M1/50‑101 (MQ=255) cgtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGggattgga < 1:134209‑M1/54‑1 (MQ=255) gtgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGggattggat > 1:1365054‑M1/47‑101 (MQ=255) tgcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGggattggatt < 2:1312846‑M1/56‑1 (MQ=255) gcaaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGAtta > 1:260825‑M1/45‑101 (MQ=255) caaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGCGGAGCGGGTGGGATTGGAttac < 1:1564678‑M1/58‑1 (MQ=255) aaattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGAttact < 2:624995‑M1/59‑1 (MQ=255) aattcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGAttactt > 1:417522‑M1/42‑101 (MQ=255) attcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGAttactta > 2:200348‑M1/41‑101 (MQ=255) tcaacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACg > 2:1321181‑M1/39‑101 (MQ=255) caacaaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAAACCCACCTTCTCCATGTGGAGAGGGGGGGATTGGATTACTTCCGa < 2:355504‑M1/64‑1 (MQ=255) caaattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTATTTACGACCt > 2:158578‑M1/35‑101 (MQ=255) aattgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGc > 1:260910‑M1/33‑101 (MQ=255) attgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGcc < 1:1405257‑M1/70‑1 (MQ=255) ttgtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCca > 2:1469944‑M1/31‑101 (MQ=255) gtgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCcagc < 2:54048‑M1/73‑1 (MQ=255) tgatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCcagca < 1:781339‑M1/74‑1 (MQ=255) gatgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCcagcag > 2:1689657‑M1/27‑101 (MQ=255) tgcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCCAGCAGtt < 1:182418‑M1/77‑1 (MQ=255) tgcatcctgtaggcctgataagcgTAGCGCATCAGCCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCCAGCAGtt > 2:369056‑M1/25‑101 (MQ=255) gcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCCAGCAGTTc > 1:559706‑M1/24‑101 (MQ=255) gcatcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCCAGCAGTTc > 1:625000‑M1/24‑101 (MQ=255) atcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCCAGCAGTTCCa > 1:810962‑M1/22‑101 (MQ=255) atcctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCCAGCAGTTCCa < 1:253228‑M1/80‑1 (MQ=255) cctgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCCAGCAGTTCCAGc < 2:728311‑M1/82‑1 (MQ=255) tgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCTTGTGGAGAGGGCGGGATTGGATTACTTACGACCTGCCAGCAGTTCCAGCAc < 2:570403‑M1/84‑1 (MQ=255) tgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCCAGCAGTTCCAGCAc < 2:434127‑M1/84‑1 (MQ=255) tgtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCCAGCAGTTCCAGCAc < 2:714722‑M1/84‑1 (MQ=255) gtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCCAGCAGTTCCAGCACt < 1:236445‑M1/85‑1 (MQ=255) gtaggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCCAGCAGTTCCAGCACt < 2:1502882‑M1/85‑1 (MQ=255) taggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCCAGCAGTTCCAGCACtt > 2:1675444‑M1/16‑101 (MQ=255) aggcctgataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCCAGCAGTTCCAGCACTTc < 1:564111‑M1/87‑1 (MQ=255) ataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCCAGCAGTTCCAGCACTTCATCCACg < 2:1232071‑M1/94‑1 (MQ=255) ataagcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCCAGCAGTTCCAGCACTTCATCCACg < 2:1145774‑M1/94‑1 (MQ=255) agcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCCAGCAGTTCCAGCACTTCATCCACGCtg < 2:1582369‑M1/97‑1 (MQ=255) agcgTAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCCAGCAGTTCCAGCACTTCATCCACGCtg > 1:578777‑M1/5‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGCGCATCAGGCAATTAACCCCACCTTCTCCATGTGGAGAGGGTGGGATTGGATTACTTACGACCTGCCAGCAGTTCCAGCACTTCATCCACGCTG > 186/1‑97 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |