New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 183 = 3330173 (2.600)96 (1.740) 59/166 0.0 57.2% intergenic (–/–) –/– –/–
?44 = 31061 0 (0.000)intergenic (–/–) –/– –/–

Only 100 of 913 total aligned reads displayed.

TCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAG  >  183/3230‑3430
                                                                                                    |                                                                                                    
tCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAAT                                                                                                      <  1:378868‑M1/101‑1 (MQ=255)
tCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAAT                                                                                                      <  2:549901‑M1/101‑1 (MQ=255)
 cccACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAAtt                                                                                                     >  2:1673289/1‑101 (MQ=255)
 cccACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGGGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAAtt                                                                                                     >  2:1616614/1‑101 (MQ=255)
   cgccTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTaa                                                                                                   <  1:576956/99‑1 (MQ=255)
       tGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCga                                                                                               >  1:741911‑M1/1‑99 (MQ=255)
        gACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATGAAATTAAGCAgt                                                                                              <  1:1489679/101‑2 (MQ=255)
        gACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATaaaacaaa                                                                                              <  1:536820‑M1/101‑9 (MQ=255)
        gACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAgt                                                                                              <  2:425790/101‑2 (MQ=255)
         gccccaTGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATaaaacaaaa                                                                                             <  2:25522‑M1/100‑10 (MQ=255)
         aCCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATaaaacaaaa                                                                                             <  1:653390‑M1/101‑10 (MQ=255)
         aCCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTTAGCgtgc                                                                                             <  1:716179‑M1/101‑5 (MQ=255)
          ccccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATaaaacaaaag                                                                                            <  2:1502138‑M1/101‑11 (MQ=255)
          ccccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAgtaa                                                                                            <  1:41628/101‑4 (MQ=255)
          ccccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAg                                                                                            <  2:1252663/101‑1 (MQ=255)
          ccccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAg                                                                                            <  1:772359/101‑1 (MQ=255)
          ccccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAg                                                                                            <  2:397526/101‑1 (MQ=255)
           cccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCgaaagg                                                                                           >  1:452628‑M1/1‑95 (MQ=255)
           cccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCgaaagg                                                                                           >  2:1200416‑M1/1‑95 (MQ=255)
              aTGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCg                                                                                        <  2:229954‑M2/101‑2 (MQ=255)
              aTGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGgcca                                                                                        <  1:609903‑M2/101‑5 (MQ=255)
               tGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATaaaacaaaaggctca                                                                                       <  2:1019660‑M1/101‑16 (MQ=255)
               tGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGgccat                                                                                       >  1:968505‑M2/1‑96 (MQ=255)
                gCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggt                                                                                      >  1:906501‑M2/1‑98 (MQ=255)
                gCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGgccatc                                                                                      >  2:107629‑M2/1‑95 (MQ=255)
                 ccGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGgccatcc                                                                                     <  2:479054‑M2/101‑8 (MQ=255)
                  cGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtca                                                                                    <  2:777119‑M2/101‑6 (MQ=255)
                   gAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcat                                                                                   >  2:104315‑M2/1‑95 (MQ=255)
                      cTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCGAAAGgccatccgtcag                                                                                <  2:753896‑M2/101‑13 (MQ=255)
                         aGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATaaaacaaaaggctcagtcgaaagac                                                                             <  1:802179‑M1/101‑26 (MQ=255)
                          gAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATaaaacaaaaggctcagtcgaaagact                                                                            <  1:480081‑M1/101‑27 (MQ=255)
                          gAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCGAAAGgccatccgtcaggatg                                                                            >  1:517332‑M2/1‑85 (MQ=255)
                          gAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCGAAAGgccatccgtcaggatg                                                                            >  2:940733‑M2/1‑85 (MQ=255)
                          gAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccg                                                                            >  2:599411‑M2/1‑88 (MQ=255)
                          gAAGTGAAACGCCGTAGCGCCAATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGCGAACTACCAGGCATCAAATTAAGCAGAAGGCCATCCTGACggatg                                                                            <  2:1403426‑M2/101‑6 (MQ=255)
                           aaGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATaaaacaaaaggctcagtcgaaagactg                                                                           <  1:494435‑M1/101‑28 (MQ=255)
                            aGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTTAGCgtgctgatatggctcagttggta                                                                          >  2:1318335‑M1/1‑78 (MQ=255)
                             gTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACggatggcc                                                                         >  1:1065000‑M2/1‑93 (MQ=255)
                              tGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtgg                                                                        >  1:866217‑M2/1‑84 (MQ=255)
                                aaaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggtt                                                                      >  2:1145192‑M2/1‑82 (MQ=255)
                                 aaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttg                                                                     <  1:1637491‑M2/101‑21 (MQ=255)
                                  aCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCGAAAGgccatccgtcaggatggccttttt                                                                    <  2:498398‑M2/101‑25 (MQ=255)
                                  aCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACggatggccttttt                                                                    <  1:1321521‑M2/101‑14 (MQ=255)
                                   cGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgta                                                                   >  2:738374‑M2/1‑79 (MQ=255)
                                    gCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTTAGCgtgctgatatggctcagttggtagagcgcac                                                                  >  2:1431475‑M1/1‑70 (MQ=255)
                                    gCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCGAAAGgccatccgtcaggatggcctttttgc                                                                  >  2:518530‑M2/1‑75 (MQ=255)
                                     ccGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaa                                                                 <  1:1402930‑M2/101‑25 (MQ=255)
                                      cGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaaa                                                                >  1:1518353‑M2/1‑76 (MQ=255)
                                       gTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACggatggcctttttgcatt                                                               >  2:793278‑M2/1‑83 (MQ=255)
                                        tAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaaaga                                                              >  2:164651‑M2/1‑74 (MQ=255)
                                         aGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCGAAAGgccatccgtcaggatggcctttttgcgttgg                                                             >  1:1670716‑M2/1‑70 (MQ=255)
                                            gcCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCGAAAGgccatccgtcaggatggcctttttgcgttggtga                                                          >  1:1164557‑M2/1‑67 (MQ=255)
                                               gATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATaaaacaaaaggctcagtcgaaagactgggccttttgttttatctgtt                                                       >  1:940393‑M1/1‑54 (MQ=255)
                                                 tGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTTAGCgtgctgatatggctcagttggtagagcgcacccttggtaagggt                                                     <  2:299522‑M1/101‑45 (MQ=255)
                                                  ggTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAActc                                                    <  2:338586/101‑1 (MQ=255)
                                                   gTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTTAGCgtgctgatatggctcagttggtagagcgcacccttggtaagggtga                                                   <  2:1292733‑M1/101‑47 (MQ=255)
                                                     aGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATaaaacaaaaggctcagtcgaaagactgggccttttgttttatctgttgtttgt                                                 >  2:203970‑M1/1‑48 (MQ=255)
                                                     aGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTc                                                 <  1:1112230/101‑1 (MQ=255)
                                                      gtgtGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTTAGCgtgctgatatggctcagttggtagagcgcacccttggtaagggtgaggt                                                <  1:181197‑M1/101‑50 (MQ=255)
                                                      gtgtGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaaagaattcggtggagcgg                                                <  1:68718‑M2/101‑42 (MQ=255)
                                                      gtgtGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACggatggcctttttgcattggcgcagaaaaaaat                                                >  1:127390‑M2/1‑68 (MQ=255)
                                                      gtgtGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTcc                                                <  2:1106490/101‑1 (MQ=255)
                                                       tgtgGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCt                                               <  1:195813/101‑1 (MQ=255)
                                                       tgtgGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCt                                               <  2:1365957/101‑1 (MQ=255)
                                                        gtgGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTg                                              <  2:1557989/101‑1 (MQ=255)
                                                           gggTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaaagaattcggtggagcggtagtt                                           >  2:571608‑M2/1‑55 (MQ=255)
                                                            ggTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACggatggcctttttgcattggcgcagaaaaaaatgccgga                                          <  1:349646‑M2/101‑40 (MQ=255)
                                                             gTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTTAGCgtgctgatatggctcagttggtagagcgcacccttggtaagggtgaggtccccagt                                         >  2:365545‑M1/1‑45 (MQ=255)
                                                               ctcCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaaagaattcggtggagcggtagttcagt                                       <  1:1233792‑M2/101‑51 (MQ=255)
                                                                tcCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCata                                      >  1:1384872/1‑101 (MQ=255)
                                                                 ccccATGCGAGAGTAGGGAACTGCCAGGCATCAAATaaaacaaaaggctcagtcgaaagactgggccttttgttttatctgttgtttgtcggtgaacgctc                                     >  1:1356733‑M1/1‑36 (MQ=255)
                                                                 ccccATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACggatggcctttttgcattggcgcagaaaaaaatgccggatgcga                                     <  1:1186686‑M2/101‑45 (MQ=255)
                                                                  cccATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCGAAAGgccatccgtcaggatggcctttttgcgttggtgaaaaaaatacctgatgcgacgct                                    <  2:192199‑M2/101‑57 (MQ=255)
                                                                  cccATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaaagaattcggtggagcggtagttcagtcgg                                    >  1:1545242‑M2/1‑48 (MQ=255)
                                                                   ccATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaaagaattcggtggagcggtagttcagtcggt                                   >  1:1000378‑M2/1‑47 (MQ=255)
                                                                     aTGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCGAAAGgccatccgtcaggatggcctttttgcgttggtgaaaaaaatacctgatgcgacgctgcg                                 <  2:986954‑M2/101‑60 (MQ=255)
                                                                     aTGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaaagaattcggtggagcggtagttcagtcggtta                                 <  2:1534886‑M2/101‑57 (MQ=255)
                                                                     aTGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaaagaattcggtggagcggtagttcagtcggtta                                 >  1:229954‑M2/1‑45 (MQ=255)
                                                                     aTGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACggatggcctttttgcattggcgcagaaaaaaatgccggatgcgacgct                                 >  2:855389‑M2/1‑53 (MQ=255)
                                                                        cGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaaagaattcggtggagcggtagttcagtcggttagaa                              <  1:266001‑M2/101‑60 (MQ=255)
                                                                        cGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACggatggcctttttgcattggcgcagaaaaaaatgccggatgcgacgctggc                              <  1:1705724‑M2/101‑52 (MQ=255)
                                                                         gagaGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaaagaattcggtggagcggtagttcagtcggttagaat                             >  2:711508‑M2/1‑41 (MQ=255)
                                                                            agTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaaagaattcggtggagcggtagttcagtcggttagaatacc                          <  1:991043‑M2/101‑64 (MQ=255)
                                                                            agTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaaagaattcggtggagcggtagttcagtcggttagaatacc                          >  1:851009‑M2/1‑38 (MQ=255)
                                                                             gTAGGGAACTGCCAGGCATCAAATTTAGCgtgctgatatggctcagttggtagagcgcacccttggtaagggtgaggtccccagttcgactctgggtatca                         >  2:15927‑M1/1‑29 (MQ=255)
                                                                               aGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaaagaattcggtggagcggtagttcagtcggttagaatacctgc                       <  1:1462426‑M2/101‑67 (MQ=255)
                                                                                 ggAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACggatggcctttttgcattggcgcagaaaaaaatgccggatgcgacgctggcgcgtcttat                     >  2:88964‑M2/1‑41 (MQ=255)
                                                                                  gAACTGCCAGGCATCAAATTTAGCgtgctgatatggctcagttggtagagcgcacccttggtaagggtgaggtccccagttcgactctgggtatcagcacc                    >  2:12320‑M1/1‑24 (MQ=255)
                                                                                  gAACTGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaaagaattcggtggagcggtagttcagtcggttagaatacctgcctg                    <  1:1430578‑M2/101‑70 (MQ=255)
                                                                                    aCTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCcac                  <  1:313668/101‑1 (MQ=255)
                                                                                      tGCCAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaaagaattcggtggagcggtagttcagtcggttagaatacctgcctgtcac                <  1:1615236‑M2/101‑74 (MQ=255)
                                                                                       gCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGa               >  2:1337557/1‑101 (MQ=255)
                                                                                        ccAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaaagaattcggtggagcggtagttcagtcggttagaatacctgcctgtcacgc              <  2:629494‑M2/101‑76 (MQ=255)
                                                                                         cAGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaaagaattcggtggagcggtagttcagtcggttagaatacctgcctgtcacgca             >  2:659589‑M2/1‑25 (MQ=255)
                                                                                         cAGGCATCAAATTAAGCAGAAGGCCATCCTGACggatggcctttttgcattggcgcagaaaaaaatgccggatgcgacgctggcgcgtcttatccagccta             >  2:1476260‑M2/1‑33 (MQ=255)
                                                                                          aGGCATCAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaaagaattcggtggagcggtagttcagtcggttagaatacctgcctgtcacgcag            >  2:838679‑M2/1‑24 (MQ=255)
                                                                                              aTCAAATTAAGCGAAAGgccatccgtcaggatggcctttttgcgttggtgaaaaaaatacctgatgcgacgctgcgcgtcttatactcccacatatgccag        <  2:964542‑M2/101‑85 (MQ=255)
                                                                                                cAAATTAAGCAGTAAGCCggtcataaaaccggtggttgtaaaagaattcggtggagcggtagttcagtcggttagaatacctgcctgtcacgcagggggtc      >  1:789812‑M2/1‑18 (MQ=255)
                                                                                                 aaaTTAAGCAGAAGGCCATCCTGACggatggcctttttgcattggcgcagaaaaaaatgccggatgcgacgctggcgcgtcttatccagcctactcttgct     <  2:1451984‑M2/101‑77 (MQ=255)
                                                                                                    ttAAGCAGTAAGCCggtcataaaaccggtggttgtaaaagaattcggtggagcggtagttcagtcggttagaatacctgcctgtcacgcagggggtcgcgg  <  2:1161370‑M2/101‑88 (MQ=255)
                                                                                                    |                                                                                                    
TCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTCCTGTCGTCATATCTACAAGCCATCCCCCCACAGATACGGTAAACTAG  >  183/3230‑3430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.