| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 181 | 1 = | 0 (0.000) | 21 (0.500) +CGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTC |
16/126 | 2.3 | 53.9% | intergenic (–/–) | –/– | –/– |
| ? | 47 | = 14458 | 57 (0.860) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTTATATTCGGCGGTGGCAATCCACGCCGCGCAAAACAGCGT > 181/1‑100 | attatagccggatgcgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCt > 2:821313‑M1/83‑101 (MQ=255) ttatagccggatgcgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTa > 1:449672‑M1/82‑101 (MQ=255) ttatagccggatgcgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTa < 2:221051‑M1/20‑1 (MQ=255) ttatagccggatgcgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTa < 1:348011‑M1/20‑1 (MQ=255) ggatgcgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAgg > 2:1550474‑M1/74‑101 (MQ=255) gatgcgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGc > 1:1682846‑M1/73‑101 (MQ=255) atgcgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCt > 2:633722‑M1/72‑101 (MQ=255) atgcgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCt > 2:807860‑M1/72‑101 (MQ=255) tgcgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTg > 2:1393681‑M1/71‑101 (MQ=255) tgcgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTg < 2:168068‑M1/31‑1 (MQ=255) cgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTCAAGGCTGCg > 2:1612743‑M1/69‑101 (MQ=255) ctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTc < 2:1688105‑M1/38‑1 (MQ=255) ctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTc > 2:500711‑M1/64‑101 (MQ=255) tggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTcc < 2:1327208‑M1/39‑1 (MQ=255) gcatcttatccggcctacggggagccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCgg < 1:1633504‑M1/43‑1 (MQ=255) tcttatccggcctacggggagccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCAt > 1:29903‑M1/56‑101 (MQ=255) tatccggcctacggggagccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTcg > 1:1316947‑M1/53‑101 (MQ=255) tatccggcctacggggagccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTcg > 2:1127986‑M1/53‑101 (MQ=255) gcctacggggagccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGgtc < 2:235929‑M1/55‑1 (MQ=255) cctagggggagcaaggacgaataaaatcgtatgccggataaggcgTTTACGCCGCACCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGgtcg > 2:321912‑M1/46‑101 (MQ=255) ggagccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTtat > 1:799136‑M1/39‑101 (MQ=255) agccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTTatat < 2:534408‑M1/65‑1 (MQ=255) agccaggccgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTTatat > 1:601129‑M1/37‑101 (MQ=255) cgaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTTATATTCGGCGGt < 2:1141154‑M1/73‑1 (MQ=255) gaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTTATATTCGGCGGTg > 1:312952‑M1/28‑101 (MQ=255) gaataaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTTATATTCGGCGGTg < 2:615247‑M1/74‑1 (MQ=255) aaaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTTATATTCGGCGGTGGCaa > 1:168068‑M1/24‑101 (MQ=255) aaatcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTTATATTCGGCGGTGGCAAt < 2:1339286‑M1/79‑1 (MQ=255) atcgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTTATATTCGGCGGTGGCAATcc > 2:176411‑M1/21‑101 (MQ=255) cgtatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTTATATTCGGCGGTGGCAATCCAc > 1:226578‑M1/19‑101 (MQ=255) tatgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTTATATTCGGCGGTGGCAATCCAcgc > 1:1639530‑M1/17‑101 (MQ=255) atgccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTTATATTCGGCGGTGGCAATCCAcgcc < 2:1707656‑M1/86‑1 (MQ=255) gccggataaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCGTTCGCGGGTCGTCTTTATATTCGGCGGTGGCAATCCAcgccgc > 1:1519126‑M1/14‑101 (MQ=255) aaggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTTATATTCGGCGGTGGCAATCCACGCCGCGCAAAAc < 2:1143167‑M1/95‑1 (MQ=255) aggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTTATATTCGGCGGTGGCAATCCACGCCGCGCAAAACa < 1:850042‑M1/96‑1 (MQ=255) ggcgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTTATATTCGGCGGTGGCAATCCACGCCGCGCAAAACAg > 1:219683‑M1/5‑101 (MQ=255) cgTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTTATATTCGGCGGTGGCAATCCACGCCGCGCAAAACAGCg > 1:1257693‑M1/3‑101 (MQ=255) gTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTTATATTCGGCGGTGGCAATCCACGCCGCGCAAAACAGCGt < 2:1602242‑M1/100‑1 (MQ=255) gTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTTATATTCGGCGGTGGCAATCCACGCCGCGCAAAACAGCGt < 1:913729‑M1/100‑1 (MQ=255) gTTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTTATATTCGGCGGTGGCAATCCACGCCGCGCAAAACAGCGt < 1:261134‑M1/100‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTACGCCGCATCCGGCCTATTTTAAGGCTGCGTTTTCCCCGGCATTCGCGGGTCGTCTTTATATTCGGCGGTGGCAATCCACGCCGCGCAAAACAGCGT > 181/1‑100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |