| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 175 | 1 = | 0 (0.000) | 32 (0.530) +AGCACCATT |
22/182 | 2.1 | 53.5% | intergenic (–/–) | –/– | –/– |
| ? | 42 | = 85 | 61 (0.920) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACCA > 175/1‑97 | tttcaacattttgaatttgcacgttttttgtaggccggataaggcgtttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCtt < 2:567706‑M1/29‑1 (MQ=255) acattttgaatttgcacgttttttgtaggccggataaggcgtttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCAt > 1:555186‑M1/68‑101 (MQ=255) cattttgaatttgcacgttttttgtaggccggataaggcgtttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATg < 1:666978‑M1/35‑1 (MQ=255) attttgaatttgcacgttttttgtaggccggataaggcgtttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGc < 2:296611‑M1/36‑1 (MQ=255) ttttgaatttgcacgttttttgtaggccggataaggcgtttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGcc < 2:1199443‑M1/37‑1 (MQ=255) ttttgaatttgcacgttttttgtaggccggataaggcgtttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGcc < 2:592731‑M1/37‑1 (MQ=255) tgaatttgcacgttttttgtaggccggataaggcgtttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTAc > 1:1486679‑M1/62‑101 (MQ=255) tgaatttgcacgttttttgtaggccggataaggcgtttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTAc < 1:1295718‑M1/40‑1 (MQ=255) aatttgcacgttttttgtaggccggataaggcgtttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACaa < 1:276472‑M1/42‑1 (MQ=255) atttgcacgttttttgtaggccggataaggcgtttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAc < 1:928916‑M1/43‑1 (MQ=255) ggccggataaggcgtttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAgg > 2:1069367‑M1/41‑101 (MQ=255) gccggataaggcgtttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACcttaacgc < 2:1554948‑M1/62‑4 (MQ=255) gccggataaggcgtttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGc > 1:1642726‑M1/40‑101 (MQ=255) ccggataaggcgtttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCg < 1:422625‑M1/63‑1 (MQ=255) cggataaggcgtttacgcagcatccggcaatggggctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCgg < 2:827214‑M1/64‑1 (MQ=255) ggataaggcgtttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGa < 2:721780‑M1/65‑1 (MQ=255) taaggcgtttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATaa < 2:1131408‑M1/68‑1 (MQ=255) aaggcgtttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAg > 1:808626‑M1/33‑101 (MQ=255) aaggcgtttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAg < 1:23262‑M1/69‑1 (MQ=255) aaggcgtttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAg > 2:810640‑M1/33‑101 (MQ=255) aggcgtttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAgg < 1:1406207‑M1/70‑1 (MQ=255) ttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTa > 1:284193‑M1/26‑101 (MQ=255) ttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTa < 2:301882‑M1/76‑1 (MQ=255) ttacgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTa > 2:152816‑M1/26‑101 (MQ=255) acgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACt > 1:826552‑M1/24‑101 (MQ=255) acgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACt > 2:560123‑M1/24‑101 (MQ=255) cgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACtt > 2:163033‑M1/23‑101 (MQ=255) cgccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACtt > 1:539776‑M1/23‑101 (MQ=255) ccgcatccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTa > 2:1295712‑M1/21‑101 (MQ=255) catccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCa > 1:1008467‑M1/18‑101 (MQ=255) catccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCa > 2:1222069‑M1/18‑101 (MQ=255) atccggcaatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTACCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCAc < 2:1469594‑M1/85‑1 (MQ=255) aatggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCa < 1:1438999‑M1/92‑1 (MQ=255) ggtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAAc > 1:1444082‑M1/7‑101 (MQ=255) gtgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAAcc < 2:1170172‑M1/96‑1 (MQ=255) tgctCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACca > 2:452502‑M1/5‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACCA > 175/1‑97 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |