New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 170 | 1 = | 0 (0.000) | 46 (0.910) +TCCGCGCTGTCCATGTCCAGACTG |
40/152 | 0.2 | 100% | intergenic (–/–) | –/– | –/– |
? | 194 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTC > 170/1‑101 | caataatcgttgaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGaaa > 2:382353‑M1/98‑101 (MQ=255) caataatcgttgaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGaaa < 2:521590‑M1/4‑1 (MQ=255) ataatcgttgaaaaatgtgtcgcatattccccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAAcc > 1:1326614‑M1/96‑101 (MQ=255) taatcgttgaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCg < 2:913194‑M1/7‑1 (MQ=255) aatcgttgaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCgg < 2:739622‑M1/8‑1 (MQ=255) aatcgttgaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCgg < 1:69780‑M1/8‑1 (MQ=255) atcgttgaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGa < 2:895613‑M1/9‑1 (MQ=255) cgttgaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGc < 2:585127‑M1/11‑1 (MQ=255) gttgaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCg > 2:1122969‑M1/90‑101 (MQ=255) tgaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTa < 2:1004710‑M1/14‑1 (MQ=255) tgaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTa < 1:104758‑M1/14‑1 (MQ=255) gaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTAc > 2:1487716‑M1/87‑101 (MQ=255) aaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACat > 2:92257‑M1/85‑101 (MQ=255) aatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACatat > 1:1316273‑M1/83‑101 (MQ=255) gcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTg < 1:1235015‑M1/27‑1 (MQ=255) atattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGaa > 2:438435‑M1/73‑101 (MQ=255) attcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGa < 1:768419‑M1/31‑1 (MQ=255) attcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGa < 2:634565‑M1/31‑1 (MQ=255) tcaccagacttaaagnnnnnnnnngtgggcgtaattgnngcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGAtt > 2:580667‑M1/69‑101 (MQ=255) agacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAg > 1:886244‑M1/64‑101 (MQ=255) acttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCa < 2:873597‑M1/40‑1 (MQ=255) acttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCa > 1:1641248‑M1/62‑101 (MQ=255) cttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCAc < 2:1312020‑M1/41‑1 (MQ=255) ttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACt > 1:843127‑M1/60‑101 (MQ=255) ttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACt < 1:219572‑M1/42‑1 (MQ=255) aagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGcc < 2:1474700‑M1/45‑1 (MQ=255) gcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCg < 2:204432‑M1/47‑1 (MQ=255) ctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCggg < 2:107645‑M1/49‑1 (MQ=255) ctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCggg < 1:764546‑M1/49‑1 (MQ=255) atcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGc < 1:1372284‑M1/51‑1 (MQ=255) gtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACt > 2:1554434‑M1/45‑101 (MQ=255) gtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACt > 2:264635‑M1/45‑101 (MQ=255) cgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACaa < 2:8795‑M1/62‑1 (MQ=255) gtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACaaa < 1:508152‑M1/63‑1 (MQ=255) taattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACaaat > 1:521595‑M1/38‑101 (MQ=255) taattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACaaat < 2:1450289‑M1/64‑1 (MQ=255) taattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACaaat < 2:889651‑M1/64‑1 (MQ=255) aattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACaaata < 2:1130210‑M1/65‑1 (MQ=255) attgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACaaataa < 2:618214‑M1/66‑1 (MQ=255) tgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACaaataaaa > 2:1235010‑M1/34‑101 (MQ=255) gttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACaaataaaat < 1:464764‑M1/69‑1 (MQ=255) ttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACaaataaaata > 1:1450295‑M1/32‑101 (MQ=255) tgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAg > 1:1024259‑M1/31‑101 (MQ=255) cagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGGGAAGATTTCGAGCACTGCCCGGGGCCGAAGTGACAAATAAAATAGcc < 2:165838‑M1/73‑1 (MQ=255) gacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTg > 2:702413‑M1/27‑101 (MQ=255) gacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTg < 1:466525‑M1/75‑1 (MQ=255) agtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTgata > 2:125768‑M1/24‑101 (MQ=255) ctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTgatagga > 1:875446‑M1/21‑101 (MQ=255) tggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTgataggat > 1:884264‑M1/20‑101 (MQ=255) tggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTgataggat > 2:121908‑M1/20‑101 (MQ=255) ggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTgataggata > 1:1189903‑M1/19‑101 (MQ=255) gacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTgataggatag > 1:634570‑M1/18‑101 (MQ=255) ggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGt < 1:1110102‑M1/89‑1 (MQ=255) acagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGTTa < 2:973977‑M1/91‑1 (MQ=255) acagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGTTa > 1:1070303‑M1/11‑101 (MQ=255) cagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAg > 1:249474‑M1/10‑101 (MQ=255) gcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCa > 1:42503‑M1/8‑101 (MQ=255) cgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCat > 1:585132‑M1/7‑101 (MQ=255) ggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCattat > 1:913199‑M1/4‑101 (MQ=255) aGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTAttt > 1:1130215‑M1/2‑101 (MQ=255) gAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTc > 1:594935/1‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTC > 170/1‑101 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |