New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 170 1 =0 (0.000)46 (0.910)
+TCCGCGCTGTCCATGTCCAGACTG
40/152 0.2 100% intergenic (–/–) –/– –/–
?194 1 = 0 (0.000)intergenic (–/–) –/– –/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTC  >  170/1‑101
                                                                                                 |                                                                                                    
caataatcgttgaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGaaa                                                                                                   >  2:382353‑M1/98‑101 (MQ=255)
caataatcgttgaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGaaa                                                                                                   <  2:521590‑M1/4‑1 (MQ=255)
  ataatcgttgaaaaatgtgtcgcatattccccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAAcc                                                                                                 >  1:1326614‑M1/96‑101 (MQ=255)
   taatcgttgaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCg                                                                                                <  2:913194‑M1/7‑1 (MQ=255)
    aatcgttgaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCgg                                                                                               <  2:739622‑M1/8‑1 (MQ=255)
    aatcgttgaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCgg                                                                                               <  1:69780‑M1/8‑1 (MQ=255)
     atcgttgaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGa                                                                                              <  2:895613‑M1/9‑1 (MQ=255)
       cgttgaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGc                                                                                            <  2:585127‑M1/11‑1 (MQ=255)
        gttgaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCg                                                                                           >  2:1122969‑M1/90‑101 (MQ=255)
          tgaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTa                                                                                         <  2:1004710‑M1/14‑1 (MQ=255)
          tgaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTa                                                                                         <  1:104758‑M1/14‑1 (MQ=255)
           gaaaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTAc                                                                                        >  2:1487716‑M1/87‑101 (MQ=255)
             aaaatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACat                                                                                      >  2:92257‑M1/85‑101 (MQ=255)
               aatgtgtcgcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACatat                                                                                    >  1:1316273‑M1/83‑101 (MQ=255)
                       gcatattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTg                                                                            <  1:1235015‑M1/27‑1 (MQ=255)
                         atattcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGaa                                                                          >  2:438435‑M1/73‑101 (MQ=255)
                           attcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGa                                                                        <  1:768419‑M1/31‑1 (MQ=255)
                           attcaccagacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGa                                                                        <  2:634565‑M1/31‑1 (MQ=255)
                             tcaccagacttaaagnnnnnnnnngtgggcgtaattgnngcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGAtt                                                                      >  2:580667‑M1/69‑101 (MQ=255)
                                  agacttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAg                                                                 >  1:886244‑M1/64‑101 (MQ=255)
                                    acttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCa                                                               <  2:873597‑M1/40‑1 (MQ=255)
                                    acttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCa                                                               >  1:1641248‑M1/62‑101 (MQ=255)
                                     cttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCAc                                                              <  2:1312020‑M1/41‑1 (MQ=255)
                                      ttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACt                                                             >  1:843127‑M1/60‑101 (MQ=255)
                                      ttaaagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACt                                                             <  1:219572‑M1/42‑1 (MQ=255)
                                         aagcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGcc                                                          <  2:1474700‑M1/45‑1 (MQ=255)
                                           gcctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCg                                                        <  2:204432‑M1/47‑1 (MQ=255)
                                             ctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCggg                                                      <  2:107645‑M1/49‑1 (MQ=255)
                                             ctatcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCggg                                                      <  1:764546‑M1/49‑1 (MQ=255)
                                               atcccagtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGc                                                    <  1:1372284‑M1/51‑1 (MQ=255)
                                                     gtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACt                                              >  2:1554434‑M1/45‑101 (MQ=255)
                                                     gtgggcgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACt                                              >  2:264635‑M1/45‑101 (MQ=255)
                                                          cgtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACaa                                         <  2:8795‑M1/62‑1 (MQ=255)
                                                           gtaattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACaaa                                        <  1:508152‑M1/63‑1 (MQ=255)
                                                            taattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACaaat                                       >  1:521595‑M1/38‑101 (MQ=255)
                                                            taattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACaaat                                       <  2:1450289‑M1/64‑1 (MQ=255)
                                                            taattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACaaat                                       <  2:889651‑M1/64‑1 (MQ=255)
                                                             aattgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACaaata                                      <  2:1130210‑M1/65‑1 (MQ=255)
                                                              attgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACaaataa                                     <  2:618214‑M1/66‑1 (MQ=255)
                                                                tgttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACaaataaaa                                   >  2:1235010‑M1/34‑101 (MQ=255)
                                                                 gttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACaaataaaat                                  <  1:464764‑M1/69‑1 (MQ=255)
                                                                  ttgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACaaataaaata                                 >  1:1450295‑M1/32‑101 (MQ=255)
                                                                   tgcagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAg                                >  1:1024259‑M1/31‑101 (MQ=255)
                                                                     cagacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGGGAAGATTTCGAGCACTGCCCGGGGCCGAAGTGACAAATAAAATAGcc                              <  2:165838‑M1/73‑1 (MQ=255)
                                                                       gacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTg                            >  2:702413‑M1/27‑101 (MQ=255)
                                                                       gacagtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTg                            <  1:466525‑M1/75‑1 (MQ=255)
                                                                          agtctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTgata                         >  2:125768‑M1/24‑101 (MQ=255)
                                                                             ctggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTgatagga                      >  1:875446‑M1/21‑101 (MQ=255)
                                                                              tggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTgataggat                     >  1:884264‑M1/20‑101 (MQ=255)
                                                                              tggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTgataggat                     >  2:121908‑M1/20‑101 (MQ=255)
                                                                               ggacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTgataggata                    >  1:1189903‑M1/19‑101 (MQ=255)
                                                                                gacatggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTgataggatag                   >  1:634570‑M1/18‑101 (MQ=255)
                                                                                     ggacagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGt              <  1:1110102‑M1/89‑1 (MQ=255)
                                                                                       acagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGTTa            <  2:973977‑M1/91‑1 (MQ=255)
                                                                                       acagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGTTa            >  1:1070303‑M1/11‑101 (MQ=255)
                                                                                        cagcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAg           >  1:249474‑M1/10‑101 (MQ=255)
                                                                                          gcgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCa         >  1:42503‑M1/8‑101 (MQ=255)
                                                                                           cgcggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCat        >  1:585132‑M1/7‑101 (MQ=255)
                                                                                              ggaGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCattat     >  1:913199‑M1/4‑101 (MQ=255)
                                                                                                aGAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTAttt   >  1:1130215‑M1/2‑101 (MQ=255)
                                                                                                 gAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTc  >  1:594935/1‑101 (MQ=255)
                                                                                                 |                                                                                                    
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAACCGGAGCGTACATATCGTACGTGAAGATTTCGAGCACTGCCCGGGGCCGAACTGACAAATAAAATAGCCTGATAGGATAGGCTGTTAGCATTATTTC  >  170/1‑101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.