New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 167 | = 2152 | 1 (0.020) | 85 (1.290) | 60/198 | 0.0 | 99.4% | intergenic (–/–) | –/– | –/– |
? | 222 | = 1442 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
GCGGTCACGCAGCAACTGTCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTCCACTATACGTTTATCACAATGGGCATTATTACTGTTGCTTCAGCAGCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGA > 167/2052‑2249 | gCGGTCACTCAGCAACTGTCCATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATT < 2:380466‑M1/101‑1 (MQ=255) gCGGTCACGCAGCAACTGTCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATT < 1:987054‑M1/101‑1 (MQ=255) gCGGTCACGCAGCAACTGTCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATCGAAGGCACAACGACTGTCGAACAATT > 2:1688271‑M1/1‑101 (MQ=255) cGGTCACGCAGCAACTGTCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTg > 2:740185‑M1/1‑100 (MQ=255) ggTCACGCAGCAACTGTCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTtt > 1:1035156‑M1/1‑99 (MQ=255) ggTCACGCAGCAACTGTCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgt > 1:1523990‑M1/1‑99 (MQ=255) gTCACGCAGCAACTGTCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgta > 2:1025759‑M1/1‑98 (MQ=255) tCACGCAGCAACTGTCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtac < 1:586513‑M1/101‑5 (MQ=255) tCACGCAGCAACTGTCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtac < 1:1100717‑M1/101‑5 (MQ=255) cACGCAGCAACTGTCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtact > 1:993168‑M1/1‑96 (MQ=255) aCGCAGCAACTGTCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactg > 2:1311520‑M1/1‑95 (MQ=255) aCGCAGCAACTGTCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactg < 2:1381046‑M1/101‑7 (MQ=255) aCGCAGCAACTGTCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactg < 2:1006187‑M1/101‑7 (MQ=255) aCGCAGCAACTGTCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactg < 2:401719‑M1/101‑7 (MQ=255) gcagcaACTGTCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgac > 2:1213047‑M1/1‑93 (MQ=255) ncaaCTGTCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGANGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgacccc > 1:1367076‑M1/2‑90 (MQ=255) gcaACTGTCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgacccc < 2:1205786‑M1/101‑12 (MQ=255) aaCTGTCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaa > 1:292743‑M1/1‑88 (MQ=255) tCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagt > 2:37943‑M1/1‑83 (MQ=255) tCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagt > 2:1103491‑M1/1‑83 (MQ=255) aTCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttgg > 2:301335‑M1/1‑80 (MQ=255) aTCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttgg < 1:716286‑M1/101‑22 (MQ=255) aTCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttgg > 2:846207‑M1/1‑80 (MQ=255) aTCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgacaccaaaaagttgg > 2:600261‑M1/1‑80 (MQ=255) cAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggac < 1:1541998‑M1/101‑24 (MQ=255) aGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggaca > 1:872342‑M1/1‑77 (MQ=255) ggCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGGATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaa < 1:1575790‑M1/101‑31 (MQ=255) ggCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaa < 1:1025764‑M1/101‑31 (MQ=255) ggCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaa < 1:553211‑M1/101‑31 (MQ=255) gTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacac > 2:581139‑M1/1‑68 (MQ=255) ttGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacg < 1:90559‑M1/101‑35 (MQ=255) tGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacga > 1:607679‑M1/1‑66 (MQ=255) gCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgag < 2:77600‑M1/101‑37 (MQ=255) gCTGTAAGTGCCGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACCACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgag > 2:1085093‑M1/1‑65 (MQ=255) cTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgagg < 2:889757‑M1/101‑38 (MQ=255) cTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgagg < 2:714914‑M1/101‑38 (MQ=255) gTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggca < 2:1523984‑M1/101‑40 (MQ=255) aGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatat < 1:192498‑M1/101‑43 (MQ=255) gTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatata > 1:404915‑M1/1‑58 (MQ=255) tGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatatag < 2:1296469‑M1/101‑45 (MQ=255) gCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatatagg < 1:57086‑M1/101‑46 (MQ=255) gCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct < 2:350510‑M1/101‑49 (MQ=255) gCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct > 1:1609563‑M1/1‑53 (MQ=255) cGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctga > 2:1391971‑M1/1‑51 (MQ=255) cGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctga > 2:1655914‑M1/1‑51 (MQ=255) cGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctga > 2:1374987‑M1/1‑51 (MQ=255) gTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgat < 1:921628‑M1/101‑52 (MQ=255) tCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgatt < 1:657199‑M1/101‑53 (MQ=255) ccTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattc > 1:93322‑M1/1‑48 (MQ=255) ccTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattc > 2:1416916‑M1/1‑48 (MQ=255) ccTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattc > 1:25639‑M1/1‑48 (MQ=255) gTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatatt > 2:1395850‑M1/1‑41 (MQ=255) gTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatatt > 2:1677382‑M1/1‑41 (MQ=255) tttATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattc > 2:1510435‑M1/1‑40 (MQ=255) ttATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattca > 1:985260‑M1/1‑39 (MQ=255) ttAGGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattca < 2:1094751‑M1/101‑63 (MQ=255) tATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaa > 2:1597333‑M1/1‑38 (MQ=255) tGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaatt < 1:444800‑M1/101‑66 (MQ=255) tGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaatt > 1:626945‑M1/1‑36 (MQ=255) tGAAGGAATGGAAGGCACAACGACTGTCGAACAATTgaactgaccccaaaaagttggacagttaaacacaaggcatataagtctgattccgatattcaatt > 2:209732‑M1/1‑36 (MQ=255) gAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattg > 2:937002‑M1/1‑35 (MQ=255) gAAGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattg > 1:867120‑M1/1‑35 (MQ=255) aaGGAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattgg < 2:1323070‑M1/101‑68 (MQ=255) ggAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggag < 1:1052008‑M1/101‑70 (MQ=255) ggAATGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggag < 1:1103496‑M1/101‑70 (MQ=255) aaTGGAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtc < 2:1674478‑M1/101‑72 (MQ=255) ggAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcaga > 1:290719‑M1/1‑27 (MQ=255) gAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagac < 2:1148655‑M1/101‑76 (MQ=255) gAAGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagac < 2:93322‑M1/101‑76 (MQ=255) aGGCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagacct > 1:1028992‑M1/1‑24 (MQ=255) ggCACAACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagacctt < 2:166020‑M1/101‑79 (MQ=255) cacaACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagacctttt < 2:569129‑M1/101‑81 (MQ=255) acaACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagacctttta < 2:717185‑M1/101‑82 (MQ=255) caACGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaa > 1:190908‑M1/1‑19 (MQ=255) aaCGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaat > 1:1534145‑M1/1‑18 (MQ=255) aCGACTGTCGAACAATTCCACTATACGTTTATCACAATGGGCATTATTACTGTTGCTTCAGCAGCAATGTTCATGCTTCTGAAAACAACCGATGGtaataa > 2:1478433/1‑101 (MQ=255) cGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaattt < 2:399474‑M1/101‑86 (MQ=255) cGACTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaattt < 1:632774‑M1/101‑86 (MQ=255) aCTGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttca > 2:1304230‑M1/1‑14 (MQ=255) tGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttactttcagg < 2:1034308‑M1/101‑90 (MQ=255) tGTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcagg < 2:1109948‑M1/101‑90 (MQ=255) gTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggc > 2:808036‑M1/1‑11 (MQ=255) gTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggc > 1:699619‑M1/1‑11 (MQ=255) gTCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggc > 2:1003164‑M1/1‑11 (MQ=255) tCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggct < 2:736420‑M1/101‑92 (MQ=255) tCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggct < 1:301335‑M1/101‑92 (MQ=255) tCGAACAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggct < 2:1187447‑M1/101‑92 (MQ=255) aCAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaatt > 2:346792‑M1/1‑6 (MQ=255) aCAATTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaatt < 1:600266‑M1/101‑96 (MQ=255) aaTTgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattct < 2:488306‑M1/101‑98 (MQ=255) | GCGGTCACGCAGCAACTGTCTATCAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTCCACTATACGTTTATCACAATGGGCATTATTACTGTTGCTTCAGCAGCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGA > 167/2052‑2249 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |