New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 160 | 1 = | 0 (0.000) | 29 (0.520) | 22/168 | 1.4 | 65.2% | intergenic (–/–) | –/– | –/– |
? | 87 | 19495 = | 31 (0.550) | intergenic (–/–) | –/– | –/– |
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCACAA > 160/1‑101 | agtcacggccgagaagaaatccgtattcatattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAAtgt > 2:954269‑M1/38‑101 (MQ=255) agtcacggcagagaagaaatccgtattcatattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAAtgt > 2:25257‑M1/38‑101 (MQ=255) tcacggcagagaagaaatccgtattcatattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAAtgtgt > 1:1402575‑M1/36‑101 (MQ=255) ggcagagaagaaatccgtattcatattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTa > 1:1233426‑M1/32‑101 (MQ=255) gcagagaagaaatccgtattcatattgtttGCGATGTACCTGATGAACTTATTGATTTAACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTaa < 1:985547‑M1/71‑1 (MQ=255) cagagaagaaatccgtattcatattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAAt > 2:252154‑M1/30‑101 (MQ=255) agagaagaaatccgtattcatattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAAtt > 1:183308‑M1/29‑101 (MQ=255) agaagaaatccgtattcatattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAAtttt > 2:1349707‑M1/27‑101 (MQ=255) agaagaaatccgtattcatattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAAtttt < 1:47529‑M1/75‑1 (MQ=255) aagaaatccgtattcatattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTAc < 1:267975‑M1/77‑1 (MQ=255) agaaatccgtattcatattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACt > 2:1442157‑M1/24‑101 (MQ=255) gaaatccgtattcatattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACTg < 2:660616‑M1/79‑1 (MQ=255) gaaatccgtattcatattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACTg < 1:1481573‑M1/79‑1 (MQ=255) atccgtattcatattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACTGACa > 2:348950‑M1/20‑101 (MQ=255) gtattcatattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACTGACATCtt > 1:643961‑M1/16‑101 (MQ=255) gtattcatattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACTGACATCtt > 2:1103332‑M1/16‑101 (MQ=255) attcatattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACTGACATCTTTc < 2:761559‑M1/88‑1 (MQ=255) ttcatattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACTGACATCTTTCa > 2:1587116‑M1/13‑101 (MQ=255) tcatattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACTGACATCTTTCaa < 2:647073‑M1/90‑1 (MQ=255) tcatattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACTGACATCTTTCaa < 2:128858‑M1/90‑1 (MQ=255) catattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACTGACATCTTTCaaa < 1:444300‑M1/91‑1 (MQ=255) atattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACTGACATCTTTCaaaa < 1:174114‑M1/92‑1 (MQ=255) atattgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACTGACATCTTTCaaaa > 2:1544220‑M1/10‑101 (MQ=255) attgtttgcgatgtcCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGActgaagaaattatgcgtggcagtctcctttcggtcaataatagcaga < 1:436578‑M2/94‑48 (MQ=255) attgtttgcgatgtcCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGActgaagaaattatgcgtggcagtctcctttcggtcaataatagcaga > 2:96589‑M2/8‑54 (MQ=255) attgtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAgg < 1:1026292‑M1/94‑1 (MQ=255) ttgtttgcgatgtCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGActgaagaaattatgcgtggcagtctcctttcggtcaataatagcagaa > 2:969827‑M2/7‑53 (MQ=255) gtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGc < 1:390370‑M1/97‑1 (MQ=255) gtttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGc > 1:647078‑M1/5‑101 (MQ=255) tttgcgaTGTCCCTGATGAACTTATTGATTTCacgtttgaatggaaagggctgaagaaattatgcgtggcagtctcctttcggtccataatagcagaacaa < 2:628345‑M2/98‑70 (MQ=255) ttgcgATGTCCCTGATGAACTTATTGATTTCacgtttgaatggaaagggctaaagaaattatgcgtggcagtctcctttcggtccataatagcagaacaaa > 2:171454‑M2/3‑31 (MQ=255) ttGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGcac > 2:1520938‑M1/3‑101 (MQ=255) tGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGcaca > 2:436023‑M1/2‑101 (MQ=255) tGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGcaca > 1:1350009‑M1/2‑101 (MQ=255) gCGATGTCCCTGATGAACTTATTGATTTCacgtttgaatggaaagggctgaagaaattatgcgtggcagtctcctttcggtccataatagcagaacaaaag > 1:1279997‑M2/1‑29 (MQ=255) gCGATGTCCCTGATGAACTTATTGATTTCacgtttgaatggaaagggctaaagaaattatgcgtggcagtctcctttcggtccataatagcagaacaaaag > 1:691682‑M2/1‑29 (MQ=255) gCGATGTCCCTGATGAACTTATTGATTTCacgtttgaatggaaagggctaaagaaattatgcgtggcagtctcctttcggtccataatagcagaacaaaag > 2:1272294‑M2/1‑29 (MQ=255) gCGATGTCCCTGATGAACTTATTGATTTCacatttgaatggaaagggctgaagaaattatgcgtggcagtctcctttcggtcaataatagcagaacaaaag > 1:950382‑M2/1‑29 (MQ=255) gCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGActgaagaaattatgcgtggcagtctcctttcggtcaataatagcagaacaaaag > 1:1092778‑M2/1‑47 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAAATTCACAATGTGTGTTAATTTTACTGACATCTTTCAAAAGGAGCACAA > 160/1‑101 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |