| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 157 | 1 = | 0 (0.000) | 32 (0.550) | 20/174 | 2.6 | 52.5% | intergenic (–/–) | –/– | –/– |
| ? | 47 | = 14510 | 58 (1.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTGG > 157/1‑100 | gtgccggatgcgatgctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtaggccggataaggcgttttcGCCGCATc < 1:731084‑M1/8‑1 (MQ=255)gtgccggatgcgatgctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtaggccggataaggcgttttcGCCGCATc > 1:913994‑M1/94‑101 (MQ=255) tgccggatgcgatgctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtaggccggataaggcgttttcGCCGCATcc > 1:1349719‑M1/93‑101 (MQ=255) tgccggatgcgatgctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtaggccggataaggcgttttcGCCGCATcc < 2:94781‑M1/9‑1 (MQ=255) gccggatgcgatgctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtaggccggataaggcgttttcGCCGCATCCg < 2:1325570‑M1/10‑1 (MQ=255) cggatgcgatgctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtaggccggataaggcgttttcGCCGCATCCGGc < 2:454424‑M1/12‑1 (MQ=255) ggatgcgatgctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtaggccggataaggcgttttcGCCGCATCCGGCa < 2:704872‑M1/13‑1 (MQ=255) ggatgcgatgctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtaggccggataaggcgttttcGCCGCATCCGGCa > 2:1000334‑M1/89‑101 (MQ=255) actgatttctttggatcttgtaggccggataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTg < 2:20533‑M1/60‑1 (MQ=255) actgatttctttggatcttgtaggccggataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTg < 2:299906‑M1/60‑1 (MQ=255) ctgatttctttggatcttgtaggccggataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGc > 1:425165‑M1/41‑101 (MQ=255) atttctttggatcttgtaggccggataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGa < 2:652078‑M1/64‑1 (MQ=255) tttctttggatcttgtaggccggataaggcgtttacGCTGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGAt > 1:449012‑M1/37‑101 (MQ=255) tttctttggatcttgtaggccggataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGAt < 1:237089‑M1/65‑1 (MQ=255) tctttggatcttgtaggccggataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTa > 1:527584‑M1/35‑101 (MQ=255) tcttgtaggccggataaggggtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTAc > 2:1540693‑M1/27‑101 (MQ=255) tcttgtaggccggataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTAc < 1:432925‑M1/75‑1 (MQ=255) cttgtaggccggataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACt > 1:867444‑M1/26‑101 (MQ=255) ttgtaggccggataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACtt > 2:1416823‑M1/25‑101 (MQ=255) tgtaggccggataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTc < 1:1223216‑M1/78‑1 (MQ=255) gtaggccggataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCg > 2:931460‑M1/23‑101 (MQ=255) ggccggataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCAt > 2:1281591‑M1/20‑101 (MQ=255) ggccggataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCAt < 1:524182‑M1/82‑1 (MQ=255) ccggataaggcgtttacGCCGCATCCGGCATGAAGCAACGTAGTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCg < 2:131497‑M1/84‑1 (MQ=255) cggataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTTATGATTACTTCGCATCgg < 2:513449‑M1/85‑1 (MQ=255) ggataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAACGTTGCCGATTAATGATTACTTCGCATCGGt < 1:429715‑M1/86‑1 (MQ=255) ggataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGt < 1:1689853‑M1/86‑1 (MQ=255) gataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTCCCGATTAATGATTACTTCGCATCGGTc > 2:1015120‑M1/15‑101 (MQ=255) gtaaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCg > 1:653811‑M1/14‑101 (MQ=255) ataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCg > 1:1131191‑M1/14‑101 (MQ=255) ataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCg > 1:278678‑M1/14‑101 (MQ=255) ataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCg < 1:197654‑M1/88‑1 (MQ=255) ataaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCg > 2:1186776‑M1/14‑101 (MQ=255) aaggcgtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCgcc < 1:1709913‑M1/90‑1 (MQ=255) aaggcgtttacGCCGCATCAGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCgcc < 2:1185300‑M1/90‑1 (MQ=255) gtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCgccgtgcc < 2:1571945‑M1/95‑1 (MQ=255) gtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCgccgtgcc < 2:93910‑M1/95‑1 (MQ=255) gtttacGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCgccgtgcc > 2:372411‑M1/7‑101 (MQ=255) acGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTg > 2:682534‑M1/3‑101 (MQ=255) cGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTgg > 2:1412438‑M1/2‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTGG > 157/1‑100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |