| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 156 | 1 = | 0 (0.000) | 43 (0.750) +AAGGCTGCCGCAGC |
37/172 | 0.4 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 78 | = 21310 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTGATTTACGTGATGAGCTGCATCATCAGGTGGAGAAAACCCTGGCGC > 156/1‑101 | agaataccggacaggtatgtgcagcggcaaaacgctttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttg > 1:774553‑M1/101‑101 (MQ=255) accggacaggtatgtgcagcggcaaaacgctttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAAt > 2:691641‑M1/96‑101 (MQ=255) accggacaggtatgtgcagcggcaaaacgctttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAAt > 1:185448‑M1/96‑101 (MQ=255) accggacaggtatgtgcagcggcaaaacgctttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAAt > 2:743347‑M1/96‑101 (MQ=255) cggacaggtatgtggagtggcaaagcgctttattatcgaagagggaattgcttcggcatttaccgaacgttttggggcagctgcggcagccttGAAAATgg > 1:1140810‑M1/94‑101 (MQ=255) cggacaggtatgtgcagcggcaaaacgctttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttgaaaaagg < 2:599675‑M1/8‑4 (MQ=255) ggacaggtatgtgcagcggcaaaacgctttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggccggcttGAGAAAggg < 2:640411‑M1/9‑1 (MQ=255) caggtatgtgcagcggcaaaacgctttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGa > 1:770527‑M1/90‑101 (MQ=255) aggtatgtgcagcggcaaaacgctttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGAt > 1:1390826‑M1/89‑101 (MQ=255) aggtatgtgcagcggcaaaacgctttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGAt < 1:281166‑M1/13‑1 (MQ=255) ggtatgtgcagcggcaaaacgctttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATc > 2:785719‑M1/88‑101 (MQ=255) tatgtgcagcggcaaaacgctttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATccc < 1:1226335‑M1/16‑1 (MQ=255) atgtgcagcggcaaaacgctttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcaggtgcgggcgccttGAAAAAGGGCGATaccc < 1:1537353‑M1/17‑1 (MQ=255) atgtgcagcggcaaaacgctttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATcccc > 1:358203‑M1/85‑101 (MQ=255) gtgcagcggcaaaacgctttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGt > 2:1572012‑M1/83‑101 (MQ=255) agcggcaaaacgctttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACg > 2:1115126‑M1/79‑101 (MQ=255) aacgctttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcaggcttGAAAATGGGCGGTCCCCGGGACGAAGAgaaa < 2:1513102‑M1/31‑2 (MQ=255) aacgctttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAAc > 1:709553‑M1/71‑101 (MQ=255) ctttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGGTCCCCGTGACGAAGAGAACGctc < 1:88531‑M1/35‑1 (MQ=255) ttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCtctc > 2:1256609‑M1/65‑101 (MQ=255) ttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCtctc > 2:815971‑M1/65‑101 (MQ=255) ttattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCtctc > 1:29522‑M1/65‑101 (MQ=255) tattatcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCg > 1:1681371‑M1/64‑101 (MQ=255) tcgaagagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCa > 1:668214‑M1/59‑101 (MQ=255) agagggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATgg < 1:717150‑M1/47‑1 (MQ=255) agggaattgcttcggcatttaccgaacgttttgtggcagctgcgggagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAatgggt < 2:419773‑M1/49‑3 (MQ=255) gggaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTc > 2:1140742‑M1/52‑101 (MQ=255) gaattgcttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGt < 2:1386681‑M1/52‑1 (MQ=255) cttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAACGGGCGATCCCCGTGACGGAGAGAACGCTCTCGGACCAATAGCtctttttcat < 1:469270‑M1/58‑4 (MQ=255) ttcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTGAtt > 1:251632‑M1/43‑101 (MQ=255) tcggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGgctcgtttttcttt < 1:1084371‑M1/60‑6 (MQ=255) ggcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTGGTTTAc < 1:102809‑M1/62‑1 (MQ=255) gcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTGATTTACg < 2:822468‑M1/63‑1 (MQ=255) gcatttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTGATTTACg > 1:1513108‑M1/39‑101 (MQ=255) atttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTGATTTTCGtg < 1:27395‑M1/65‑1 (MQ=255) ttaccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTTATTTTCGtgat < 2:636239‑M1/67‑1 (MQ=255) ccgaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTGATTTACGTGATGAg > 2:972679‑M1/32‑101 (MQ=255) gaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTGATTTACGTGGTGAGCt < 2:918552‑M1/72‑1 (MQ=255) gaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTGATTTACGTGATGAGCt < 1:334138‑M1/72‑1 (MQ=255) gaacgttttgtggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGCTTTGATTTTCGTGCTGAGCt < 2:226264‑M1/72‑1 (MQ=255) ttttgtggcagctgcggcagccttGAGAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTGATTTACGTGATGAGCTGcatc > 1:640416‑M1/25‑101 (MQ=255) tggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTGATTTACGTGATGAGCTGCATCATCAg > 2:1599424‑M1/20‑101 (MQ=255) ggcagctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTGATTTACGTGATGAGCTGCATCATCAgg > 2:640862‑M1/19‑101 (MQ=255) ctgcggcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTGATTTACGTGATGAGCTGCATCATCAGGTGgag < 2:1299429‑M1/88‑1 (MQ=255) gcagccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTGATTTACGTGATGAGCTGCATCATCAGGTGGAGAAAAc > 1:599680‑M1/9‑101 (MQ=255) agccttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTAATTTACGTGATGAGCTGCCTCATCAGGTGGAGAAAAccc < 2:749955‑M1/95‑1 (MQ=255) cttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTGATTTACGTGATGAGCTGCATCATCAGGTGGGGAAAACCCtgc < 2:748074‑M1/98‑2 (MQ=255) ttGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTGATTTACGTGATGAGCTGCATCATCAGGTGGAGAAAACCCTGgc > 1:1613036‑M1/3‑101 (MQ=255) gAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTGATTTACGTGATGAGCTGCATCATCAGGTGGAGAAAACCCTGgcgc < 1:1386687/101‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTGATTTACGTGATGAGCTGCATCATCAGGTGGAGAAAACCCTGGCGC > 156/1‑101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |