New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 150 | = 9892 | 0 (0.000) | 28 (0.420) | 19/200 | 2.9 | 47.9% | intergenic (–/–) | –/– | –/– |
? | 9 | 12520 = | 61 (0.920) | intergenic (–/–) | –/– | –/– |
ACCGTGAAACCTTCGCGGATATTGGTCAGACTCTGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 150/9793‑9892 | aCCGTGAAACCTTCGCGGATATTGGTCAGACTCTGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTt < 2:527752‑M1/101‑2 (MQ=255) gTGAAACCTTCGCGGATATTGGTCAGACTCTGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgat < 1:1136966‑M1/101‑5 (MQ=255) gTGAAACCTTCGCGGATATTGGTCAGACTCTGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgat < 2:1435974‑M1/101‑5 (MQ=255) gTGAAACCTTCGCGGATATTGGTCAGACTCTGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgat < 1:385819‑M1/101‑5 (MQ=255) tGAAACCTTCGCGGATATTGGTCAGACTCTGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatg > 1:1708911‑M1/1‑96 (MQ=255) cTTCGCGGATATTGGTCAGACTCTGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgccctca < 1:764077‑M1/101‑12 (MQ=255) cTTCGCGGATATTGGTCAGACTCTGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgaccccc > 2:1022819‑M1/1‑90 (MQ=255) cgcgGATATTGGTCAGACTCTGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgccctcaccc < 1:573739‑M1/101‑15 (MQ=255) ggATATTGGTCAGACTCTGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgccctcaccccgg < 1:883920‑M1/101‑18 (MQ=255) atTGGTCAGACTCTGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgccctcaccccggccct < 2:278585‑M1/101‑22 (MQ=255) tGGTCAGACTCTGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgccctcaccccggccctct < 2:913713‑M1/101‑24 (MQ=255) tGGTCAGACTCTGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgccctcacccccgccctcc > 2:275094‑M1/1‑78 (MQ=255) ggTCAGACTCTGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgccctcaccccggccctctc < 1:94599‑M1/101‑25 (MQ=255) aCTCTGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgccctcaccccggccctctcccacag < 1:1631210‑M1/101‑31 (MQ=255) tctGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatggcctcccccccgccccctcccccaagg > 2:144839‑M1/1‑69 (MQ=255) tctGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgccctcaccccggccctctcccacaggg < 1:1466797‑M1/101‑33 (MQ=255) tGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgattgccccccccccccccccctcccccccggg > 2:392456‑M1/1‑67 (MQ=255) tGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgccctccccccggccctctcccacagggag < 1:195187‑M1/101‑35 (MQ=255) gCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgccctcaccccggccctctcccacagggagag < 1:625017‑M1/101‑37 (MQ=255) cAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgccctcaccccggccctctcccacagggagagg < 1:229027‑M1/101‑38 (MQ=255) cAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgccctcaccccggccctctcccacagggagagg < 1:1291778‑M1/101‑38 (MQ=255) aaaTATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgccctcaccccggccctctcccacagggagagggt < 2:1027970‑M1/101‑40 (MQ=255) atTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgccctcaccccggccctctcccacagggagagggtgaaa < 1:1627742‑M1/101‑44 (MQ=255) atTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgccctcaccccggccccctcccacagggagaggggggaa > 2:547109‑M1/1‑58 (MQ=255) tttGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgccctcaccccggccctctcccacagggagagggtgaaaac < 1:1544736‑M1/101‑46 (MQ=255) ggTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgccctcaccccggccctctcccacagggagagggtgaaaacatg < 2:321460‑M1/101‑49 (MQ=255) aCTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgccctcaccccggccctctcccacagggagagggtgaaaacatgttg < 2:532874‑M1/101‑52 (MQ=255) ttCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCTtgatgccctcaccccggccctctcccacagggagagggtgaaaacatgttgat < 1:8834‑M1/101‑54 (MQ=255) | ACCGTGAAACCTTCGCGGATATTGGTCAGACTCTGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGATAATGGGTGCGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 150/9793‑9892 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |