New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 149 | 1 = | 0 (0.000) | 65 (0.990) +T |
49/198 | 0.2 | 100% | intergenic (–/–) | –/– | –/– |
? | 223 | = 698 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATACATCCGGCACATTTCACTCACGCCGTTAACTT > 149/1‑100 | gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCt > 1:455658‑M1/86‑101 (MQ=255) gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCt < 2:1585054‑M1/16‑1 (MQ=255) gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCt > 2:1533394‑M1/86‑101 (MQ=255) gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCt < 1:653469‑M1/16‑1 (MQ=255) gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCt > 2:1206208‑M1/86‑101 (MQ=255) gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCt > 1:1514989‑M1/86‑101 (MQ=255) gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCt > 2:633804‑M1/86‑101 (MQ=255) cgcaggagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCt > 1:1553192‑M1/86‑101 (MQ=255) tcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCtt < 1:1085243‑M1/17‑1 (MQ=255) cagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTg < 1:1060541‑M1/18‑1 (MQ=255) agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGt < 2:1000945‑M1/19‑1 (MQ=255) gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTc < 1:844653‑M1/20‑1 (MQ=255) tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTcg < 1:460534‑M1/21‑1 (MQ=255) agctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaactccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTcgc > 2:25128‑M1/80‑101 (MQ=255) gctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTcgcg > 2:1054447‑M1/79‑101 (MQ=255) gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGtt > 2:1677026‑M1/76‑101 (MQ=255) aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCa < 2:338877‑M1/30‑1 (MQ=255) ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCAt > 2:713048‑M1/71‑101 (MQ=255) gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATg < 1:642354‑M1/32‑1 (MQ=255) ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATAACCTTGTCGCGGATGGCATGAcc < 2:645727‑M1/35‑1 (MQ=255) acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTa > 1:314154‑M1/65‑101 (MQ=255) acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTa > 2:1029929‑M1/65‑101 (MQ=255) agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATc > 1:413056‑M1/63‑101 (MQ=255) ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAg < 2:31161‑M1/41‑1 (MQ=255) gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGtt < 1:816355‑M1/43‑1 (MQ=255) agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTa < 1:846694‑M1/46‑1 (MQ=255) aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAAt > 2:1060536‑M1/54‑101 (MQ=255) aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAAt > 1:1381813‑M1/54‑101 (MQ=255) aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATg > 2:61810‑M1/53‑101 (MQ=255) cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGa < 1:225912‑M1/51‑1 (MQ=255) aagccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGatat > 1:220561‑M1/48‑101 (MQ=255) atcctctggagcacctcaaaaacaccatcatacactaaatctgtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATAtt > 1:806604‑M1/47‑101 (MQ=255) agccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATAtt > 1:291008‑M1/47‑101 (MQ=255) agccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATAtt > 1:1585060‑M1/47‑101 (MQ=255) gccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTg > 2:1387820‑M1/46‑101 (MQ=255) gccactggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTg < 1:444629‑M1/56‑1 (MQ=255) actggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCg > 2:513166‑M1/43‑101 (MQ=255) actggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCg > 2:876598‑M1/43‑101 (MQ=255) ggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGAt > 1:312130‑M1/40‑101 (MQ=255) ggagcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGAt > 1:1324415‑M1/40‑101 (MQ=255) agcacctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGAtgt < 1:408933‑M1/64‑1 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGAt > 1:1000950‑M1/35‑101 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGAt > 1:266487‑M1/35‑101 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATa < 1:100220‑M1/68‑1 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATa < 1:539683‑M1/68‑1 (MQ=255) tcaaaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATACa < 1:1489505‑M1/70‑1 (MQ=255) aaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATACATcc > 1:13452‑M1/29‑101 (MQ=255) aaaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATACATcc < 1:362496‑M1/73‑1 (MQ=255) aaacaccatcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATACATCCg < 1:179546‑M1/74‑1 (MQ=255) tcatacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATACATCCGGCACAttt > 1:153325‑M1/20‑101 (MQ=255) catacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATACATCCGGCACATTtc > 1:419174‑M1/19‑101 (MQ=255) tacactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATACATCCGGCACATTtcac > 2:789877‑M1/17‑101 (MQ=255) acactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATACATCCGGCACATTtcact < 1:1478263‑M1/86‑1 (MQ=255) cactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGTTACATCCGGCACATTtcactc > 1:339053‑M1/15‑101 (MQ=255) cactaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATACATCCGGCACATTtcactc < 2:42908‑M1/87‑1 (MQ=255) ctaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATACATCCGGCACATTtcactcac < 2:371290‑M1/89‑1 (MQ=255) ctaaatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATACATCCGGCACATTtcactcac < 1:482830‑M1/89‑1 (MQ=255) aatcagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATACATCCGGCACATTTCACTCACGcc < 2:1084893‑M1/92‑1 (MQ=255) cagtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATACATCCGGCACATTTCACTCACGCCGtt > 2:1644247‑M1/7‑101 (MQ=255) agtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGCCCTATCATTTTTAATGGATATTGCCGGAGGTGATACATCCGGCACATTTCACTCACGCCGTTa > 2:888515‑M1/6‑101 (MQ=255) agtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATACATCCGGCACATTTCACTCACGCCGTTa < 2:535776‑M1/96‑1 (MQ=255) gtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATACATCCGGCACATTTCACTCACGCCGTTaa < 2:560925‑M1/97‑1 (MQ=255) gtaaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATACATCCGGCACATTTCACTCACGCCGTTaa < 1:620923‑M1/97‑1 (MQ=255) taaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATACATCCGGCACATTTCACTCACGCCGTTAAc > 2:844648‑M1/4‑101 (MQ=255) aaGTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATACATCCGGCACATTTCACTCACGCCGTTAACt > 2:29021‑M1/3‑101 (MQ=255) aGTTGGCAGCATCACCTTGTCGCGGTTGGCGTGACCTATCAGTTTTAATGGATATTTCCGGATGTGATACATCCGGCACATTTCACTCACGCCGTTAACtt < 2:786141‑M1/100‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTGGCAGCATCACCTTGTCGCGGTTGGCATGACCTATCAGTTTTAATGGATATTGCCGGATGTGATACATCCGGCACATTTCACTCACGCCGTTAACTT > 149/1‑100 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |