| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 143 | = 10889 | 0 (0.000) | 40 (0.700) | 17/172 | 2.6 | 50.6% | intergenic (–/–) | –/– | –/– |
| ? | 91 | 8339 = | 78 (1.360) | intergenic (–/–) | –/– | –/– | |||||
ATGATGTTAGGGTTTACGGTATAAAAAGACCGTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 143/10789‑10889 | atgatgTTAGGGTTTACGGTATAAAAAGACCGTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCT > 1:1032840‑M1/1‑101 (MQ=255) gatgTTAGGGTTTACGGTATAAAAAGACCGTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTac < 2:1683680‑M1/101‑3 (MQ=255) atgTTAGGGTTTACGGTATAAAAAGTCCGTATTCGGATATTTTAAAGGATCTGTCCGCCCATTAAACTTATGCCATTCCCAAACCTGCCTGTTTCGCtacc < 2:1021966/101‑4 (MQ=255) aGGGTTTACGGTATAAAAAGACCGTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttat > 2:827184‑M1/1‑93 (MQ=255) aGGGTTTACGGTATAAAAAGACCGTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttat > 1:1212010‑M1/1‑93 (MQ=255) ggTTTACGGTATAAAAAGACCGTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatca > 1:808740‑M1/1‑91 (MQ=255) tttACGGTATAAAAAGACCGTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcagg > 2:763026‑M1/1‑89 (MQ=255) ttACGGTATAAAAAGACCGTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggc < 1:595127‑M1/101‑14 (MQ=255) ttACGGTATAAAAAGACCGTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggc > 2:874697‑M1/1‑88 (MQ=255) ataAAAAGACCGTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgct > 2:1602796‑M1/1‑81 (MQ=255) ataAAAAGACCGTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgct > 1:202‑M1/1‑81 (MQ=255) ataAAAAGACCGTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgct < 1:583252‑M1/101‑21 (MQ=255) ataAAAAGACCGTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgct > 2:1675515‑M1/1‑81 (MQ=255) taAAAAGACCGTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgcta > 2:127835‑M1/1‑80 (MQ=255) aaaaaGACCGTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctag > 2:41069‑M1/1‑79 (MQ=255) aaaaaGACCGTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctag > 1:459252‑M1/1‑79 (MQ=255) aaGACCGTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctg < 2:1497747‑M1/101‑26 (MQ=255) gTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaat > 2:1065290‑M1/1‑70 (MQ=255) gTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaat > 2:1511037‑M1/1‑70 (MQ=255) gTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaat > 2:1232463‑M1/1‑70 (MQ=255) gTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaat < 2:878823‑M1/101‑32 (MQ=255) tATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatc < 2:83041‑M1/101‑33 (MQ=255) ttCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatcca < 1:1247685‑M1/101‑35 (MQ=255) cGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatccatt > 2:1428329‑M1/1‑65 (MQ=255) cGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatccatt > 1:1694580‑M1/1‑65 (MQ=255) cGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatccatt > 1:1532628‑M1/1‑65 (MQ=255) cGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatccatt < 2:683443‑M1/101‑37 (MQ=255) aaaTATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatccattgat < 2:1350821‑M1/101‑40 (MQ=255) aaaTATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatccattgat > 2:216755‑M1/1‑62 (MQ=255) aaTATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatccattgatt < 2:209086‑M1/101‑41 (MQ=255) atatGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatccattgattt > 1:355495‑M1/1‑60 (MQ=255) atGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatccattgattttg > 2:1548376‑M1/1‑58 (MQ=255) gCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatccattgattttgca > 1:540043‑M1/1‑56 (MQ=255) ccGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatccattgattttgcaca < 1:262057‑M1/101‑48 (MQ=255) ggATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatccattgattttgcacaat < 1:41069‑M1/101‑50 (MQ=255) ggATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatccattgattttgcacaat < 2:1542202‑M1/101‑50 (MQ=255) gATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatccattgattttgcacaatt > 1:94763‑M1/1‑51 (MQ=255) tctctcCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatccattgattttgcacaatttt > 1:829104‑M1/1‑49 (MQ=255) tctctcCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatccattgattttgcacaatttt > 2:271495‑M1/1‑49 (MQ=255) ctctcCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatccattgattttgcacaattttg > 2:1548244‑M1/1‑48 (MQ=255) ctctcCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatccattgattttgcacaattttg > 2:1219487‑M1/1‑48 (MQ=255) cGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTacgcttatcaggcctacgctagctgtgcaatccattgattttgcacaattttgtaggc > 2:1157099‑M1/1‑43 (MQ=255) | ATGATGTTAGGGTTTACGGTATAAAAAGACCGTATTCGGAAATATGCCCGGATCTCTCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 143/10789‑10889 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |