New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 142 = 112210 (0.000)36 (0.840)
+GCGGCAGCGTCGCATCAGGCATCGTGCACCGAATGC
27/128 0.4 83.6% intergenic (–/–) –/– –/–
?74 7985 = 22 (0.330)intergenic (–/–) –/– –/–

ACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTTGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  142/11121‑11221
                                                                                                    |                                                                                                  
aCGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTTGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGAc                                                                                                    <  1:897919/101‑1 (MQ=255)
       gATCTAACAGCCTGAAAGCCGCGCCCGTTGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcag                                                                                             <  1:358549‑M1/101‑8 (MQ=255)
          cTAACAGCCTGAAAGCCGCGCCCGTTGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgt                                                                                          >  2:23543‑M1/1‑91 (MQ=255)
           tAACAGCCTGAAAGCCGCGCCCGTTGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtc                                                                                         <  2:768007‑M1/101‑12 (MQ=255)
               aGCCTGAAAGCCGCGCCCGTTGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcat                                                                                     <  1:674968‑M1/101‑16 (MQ=255)
                   tGAAAGCCGCGCCCGTTGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcagg                                                                                 <  1:1262647‑M1/101‑20 (MQ=255)
                   tGAAAGCCGCGCCCGTTGAGCTGCGCCAGTGGCTGGAAGAGGGGTTGCTGACAAGCGATTGATTTTGTAGGGCTGATAAGACgcggcagcgtcgcatcaag                                                                                 >  1:715012‑M1/1‑82 (MQ=255)
                      aaGCCGCGCCCGTTGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcat                                                                              <  1:773742‑M1/101‑23 (MQ=255)
                      aaGCCGCGCCCGTTGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcat                                                                              <  2:1594352‑M1/101‑23 (MQ=255)
                       aGCCGCGCCCGTTGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatc                                                                             >  1:1442991‑M1/1‑78 (MQ=255)
                            cgcCCGTTGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgca                                                                        >  1:1049678‑M1/1‑73 (MQ=255)
                              cccGTTGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcacc                                                                      >  1:45489‑M1/1‑71 (MQ=255)
                               ccGTTGAGCTGCGCCAGTGGCTGGAAGAGGGGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccg                                                                     >  2:198599‑M1/1‑70 (MQ=255)
                                   tGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatg                                                                 <  2:111627‑M1/101‑36 (MQ=255)
                                     aGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgcc                                                               >  2:1161871‑M1/1‑64 (MQ=255)
                                        tGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccgga                                                            <  1:1520039‑M1/101‑41 (MQ=255)
                                         gcgcCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggat                                                           <  1:870053‑M1/101‑42 (MQ=255)
                                         gcgcCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggat                                                           <  1:600351‑M1/101‑42 (MQ=255)
                                           gcCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgc                                                         <  2:1038368‑M1/101‑44 (MQ=255)
                                                   cTGGAAGATGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcagcaggcatcgtgcaccgaatgccggatgcggcgtgaa                                                 <  1:1034894‑M1/101‑52 (MQ=255)
                                                     ggAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacg                                               >  2:1555076‑M1/1‑48 (MQ=255)
                                                     ggAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacg                                               <  1:1075347‑M1/101‑54 (MQ=255)
                                                         gagGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgcctt                                           <  2:179745‑M1/101‑58 (MQ=255)
                                                         gagGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgcctt                                           <  1:1430101‑M1/101‑58 (MQ=255)
                                                          agGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgcctta                                          >  2:710072‑M1/1‑43 (MQ=255)
                                                          agGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgcctta                                          >  1:1490715‑M1/1‑43 (MQ=255)
                                                             tgtTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcatcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatcc                                       <  2:359510‑M1/101‑62 (MQ=255)
                                                             tgtTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatcc                                       <  1:68293‑M1/101‑62 (MQ=255)
                                                             tgtTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatcc                                       >  2:1007791‑M1/1‑40 (MQ=255)
                                                                tGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatccgtc                                    >  2:567728‑M1/1‑37 (MQ=255)
                                                                   tGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatccgtccta                                 <  1:1472729‑M1/101‑68 (MQ=255)
                                                                   tGAAAAGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcaccaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatccgtccta                                 <  2:715007‑M1/101‑68 (MQ=255)
                                                                     aaaaGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatccgtcctaca                               >  2:1139970‑M1/1‑32 (MQ=255)
                                                                        aGCGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatccgtcctacaatg                            <  2:977540‑M1/101‑73 (MQ=255)
                                                                          cGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatccgtcctacaatgcc                          >  2:979399‑M1/1‑27 (MQ=255)
                                                                          cGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatccgtcctacaatgcc                          >  2:1260500‑M1/1‑27 (MQ=255)
                                                                          cGATTGATTTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatccgtcctacaatgcc                          >  1:1467216‑M1/1‑27 (MQ=255)
                                                                           gattgattTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatccgtcctacaatgcct                         <  2:45489‑M1/101‑76 (MQ=255)
                                                                            attgattTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatccgtcctacaatgcctg                        >  1:953484‑M1/1‑25 (MQ=255)
                                                                            attgattTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatccgtcctacaatgcctg                        >  2:339868‑M1/1‑25 (MQ=255)
                                                                            attgattTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgggaaagccttatccgtccaacaatgcctg                        >  1:244228‑M1/1‑25 (MQ=255)
                                                                              tgattTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatccgtcctacaatgcctgat                      <  2:390677‑M1/101‑79 (MQ=255)
                                                                              tgattTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatccgtcctacaatgcctgat                      >  2:1366737‑M1/1‑23 (MQ=255)
                                                                               gattTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatccgtcctacaatgcctgata                     >  1:326683‑M1/1‑22 (MQ=255)
                                                                               gattTTGTAGGCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatccgtcctacaatgcctgata                     <  1:1106631‑M1/101‑80 (MQ=255)
                                                                                         gCCTGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatccgtcctacaatgcctgatatacggcattg           <  1:1208055‑M1/101‑90 (MQ=255)
                                                                                            tGATAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatccgtcctacaatgcctgatatacggcattgtga        >  1:1528030‑M1/1‑9 (MQ=255)
                                                                                               tAAGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatccgtcctacaatgcctgatatacggcattgtgaaac     <  1:915231‑M1/101‑96 (MQ=255)
                                                                                                 aGACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatccgtcctacaatgcctgatatacggcattgtgaaacgg   >  2:232879‑M1/1‑4 (MQ=255)
                                                                                                  gACgcggcagcgtcgcatcaggcatcgtgcaccgaatgccggatgcggcgtgaacgccttatccgtcctacaatgcctgatatacggcattgtgaaacgga  >  1:1424474‑M1/1‑3 (MQ=255)
                                                                                                    |                                                                                                  
ACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTTGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  142/11121‑11221

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.