New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 142 5575 =6 (0.090)82 (1.230) 60/200 0.0 96.5% intergenic (–/–) –/– –/–
?222 = 1443 0 (0.000)intergenic (–/–) –/– –/–

Only 100 of 154 total aligned reads displayed.

CTGCACGCTACAGCAGGTGGCTGATGCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCGGTAAGTTCTACCCGCTGCATACCGGACATATCTA  >  142/5475‑5675
                                                                                                    |                                                                                                    
  tcACGCTACAGCAGGTGGCTGATGCCAGCGGTATGACCAAAGGGTATTTAAGCCAATTTCTGAATGCCAAAAACAAAAGCCCCAGCGCGCAAAAGCTGGAg                                                                                                    <  2:1645571/100‑1 (MQ=255)
  gCACGCTACAGCAGGTGGCTGATGCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAg                                                                                                    <  2:1069565/101‑1 (MQ=255)
  gCACGCTACAGCAGGTGGCTGATGCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAg                                                                                                    <  2:1454691/101‑1 (MQ=255)
  agaattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacagag                                                                                                    >  2:354933‑M1/99‑101 (MQ=255)
    aattagcctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGc                                                                                                  >  1:306741‑M1/97‑101 (MQ=255)
        tACAGCAGGTGGCTGATGCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtac                                                                                              >  1:369181‑M1/1‑96 (MQ=255)
           ctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCAc                                                                                           <  1:342082‑M1/12‑1 (MQ=255)
           ctgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAAGCGTTGCAc                                                                                           <  1:1444154‑M1/12‑1 (MQ=255)
            tgaaattaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCAcc                                                                                          <  2:573956‑M1/13‑1 (MQ=255)
             cagGTGGCTGATGCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcac                                                                                         >  2:1535031‑M1/1‑91 (MQ=255)
               ggTGGCTGATGCCAGCGGTATGACCAAAGGGTATTTAAGCCTGTTTCTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcaccc                                                                                       >  2:387465‑M1/1‑89 (MQ=255)
               ggTGGCTGATGCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcaccc                                                                                       <  2:1014081‑M1/101‑13 (MQ=255)
                 ttaaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGtttt                                                                                     <  1:386002‑M1/18‑1 (MQ=255)
                   aaaaggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGtttttt                                                                                   >  1:1011184‑M1/82‑101 (MQ=255)
                    cTGATGCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccatttt                                                                                  <  1:1081845‑M1/101‑18 (MQ=255)
                    cTGATGCCAGAAGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGAAAAAGCTGGAGGtgtactgcgcccatttt                                                                                  <  2:292849‑M1/101‑18 (MQ=255)
                      aggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTggg                                                                                >  1:478960‑M1/79‑101 (MQ=255)
                       ggtctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtagaGAGGCGTTGCACCGTTTTTTgggg                                                                               <  2:826571‑M1/24‑1 (MQ=255)
                        tGCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttg                                                                              <  1:1378309‑M1/101‑22 (MQ=255)
                         gCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGggtactgcacccattttgttgg                                                                             >  2:596272‑M1/1‑79 (MQ=255)
                          ctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCtt                                                                            <  1:334003‑M1/27‑1 (MQ=255)
                          ctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCtt                                                                            <  2:186192‑M1/27‑1 (MQ=255)
                          ctgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCtt                                                                            >  1:1074545‑M1/75‑101 (MQ=255)
                           tgactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTg                                                                           >  1:1571783‑M1/74‑101 (MQ=255)
                           cAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggac                                                                           >  2:1020980‑M1/1‑77 (MQ=255)
                              cGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgat                                                                        <  1:919901‑M1/101‑28 (MQ=255)
                               ggTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatg                                                                       >  2:904348‑M1/1‑73 (MQ=255)
                                  aTGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaa                                                                    <  1:674030‑M1/101‑32 (MQ=255)
                                    ttgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTcccc                                                                  <  2:69445‑M1/37‑1 (MQ=255)
                                      gaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCgg                                                                <  1:1217268‑M1/39‑1 (MQ=255)
                                      ccAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatgga                                                                >  1:1601456‑M1/1‑66 (MQ=255)
                                       cAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaa                                                               <  1:492444‑M1/101‑37 (MQ=255)
                                       cAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaa                                                               <  1:755444‑M1/101‑37 (MQ=255)
                                       aatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGc                                                               <  2:1433844‑M1/40‑1 (MQ=255)
                                       aatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGc                                                               <  2:1184880‑M1/40‑1 (MQ=255)
                                         tatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCag                                                             >  1:969687‑M1/60‑101 (MQ=255)
                                            cggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCagaag                                                          <  1:797814‑M1/45‑1 (MQ=255)
                                              gaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAgaagaa                                                        >  1:89364‑M1/55‑101 (MQ=255)
                                               aTTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccct                                                       >  2:1301622‑M1/1‑57 (MQ=255)
                                                 tcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAAc                                                     >  1:863347‑M1/52‑101 (MQ=255)
                                                  tAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaat                                                    <  1:551625‑M1/101‑48 (MQ=255)
                                                  tAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaat                                                    >  1:1681411‑M1/1‑54 (MQ=255)
                                                  cagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAAcc                                                    >  1:774805‑M1/51‑101 (MQ=255)
                                                   agacctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCa                                                   >  2:1649861‑M1/50‑101 (MQ=255)
                                                     acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCAtt                                                 >  1:888108‑M1/48‑101 (MQ=255)
                                                      ccAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTg                                                <  2:901097/101‑1 (MQ=255)
                                                       cAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtc                                               >  2:652311‑M1/1‑49 (MQ=255)
                                                        aGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca                                              <  1:274945‑M1/101‑54 (MQ=255)
                                                         atatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGgtg                                             <  1:290396‑M1/58‑1 (MQ=255)
                                                         atatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGgtg                                             <  2:163651‑M1/58‑1 (MQ=255)
                                                          ttACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaa                                            <  2:1255685‑M1/101‑56 (MQ=255)
                                                          tatgcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGgtgt                                            <  2:1460843‑M1/59‑1 (MQ=255)
                                                           tACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaag                                           >  1:734978‑M1/1‑45 (MQ=255)
                                                             gcctcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGt                                         <  1:971354‑M1/62‑1 (MQ=255)
                                                             cTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagcc                                         >  1:1413300‑M1/1‑43 (MQ=255)
                                                             cTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagcc                                         >  2:357899‑M1/1‑43 (MQ=255)
                                                              tGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagcca                                        >  2:341151‑M1/1‑42 (MQ=255)
                                                               gAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaa                                       >  2:600411‑M1/1‑41 (MQ=255)
                                                               gAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcaaccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaa                                       <  1:823442‑M1/101‑61 (MQ=255)
                                                                tcgtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTAtt                                      >  2:1398652‑M1/37‑101 (MQ=255)
                                                                tcgtgtttaactgtccaactttttggggtcagtacaGAGGCCTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTAtt                                      >  1:184047‑M1/37‑101 (MQ=255)
                                                                aaTGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaa                                      >  2:939605‑M1/1‑40 (MQ=255)
                                                                  gtgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCg                                    <  1:1614933‑M1/67‑1 (MQ=255)
                                                                   tgtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCgg                                   <  1:589941‑M1/68‑1 (MQ=255)
                                                                    gtttaactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCGGt                                  <  2:1544936‑M1/69‑1 (MQ=255)
                                                                    ccAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatac                                  <  2:1466211‑M1/101‑66 (MQ=255)
                                                                      aaaaTCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccc                                >  2:1364975‑M1/1‑34 (MQ=255)
                                                                      aaaaTCAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccc                                >  1:1026665‑M1/1‑34 (MQ=255)
                                                                       taactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCGGTAAg                               >  1:1465409‑M1/30‑101 (MQ=255)
                                                                       taactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCGGTAAg                               <  2:1510338‑M1/72‑1 (MQ=255)
                                                                       taactgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCGGTAAg                               >  2:866820‑M1/30‑101 (MQ=255)
                                                                         actgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCGGTAAGtt                             >  1:1048324‑M1/28‑101 (MQ=255)
                                                                           tgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCGGTaagtact                           >  1:276340‑M1/26‑98 (MQ=255)
                                                                           tgtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCGGTAAGTTCt                           >  2:1143755‑M1/26‑101 (MQ=255)
                                                                           cAAAAGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttg                           >  2:539319‑M1/1‑29 (MQ=255)
                                                                            gtccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCGGTAAGTTCTa                          <  1:1135271‑M1/77‑1 (MQ=255)
                                                                            aaaaGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga                          >  1:1269869‑M1/1‑28 (MQ=255)
                                                                            aaaaGCCCCAGCGCACAAAAGCTGGAGGCATTGCACCGTTATTTGGGACTTGAATTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTCGGTAAGTTTTa                          <  1:1515209/101‑1 (MQ=255)
                                                                             aaaGCCCCAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaa                         >  1:1315158‑M1/1‑27 (MQ=255)
                                                                              ccaactttttggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCGGTAAGTTCTAcc                        <  1:124158‑M1/79‑1 (MQ=255)
                                                                                  cccAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcg                    >  2:1670953‑M1/1‑22 (MQ=255)
                                                                                  cccAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcg                    >  1:100166‑M1/1‑22 (MQ=255)
                                                                                  cccAGCGCGCAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcg                    <  2:1170054‑M1/101‑80 (MQ=255)
                                                                                      ttggggtcagtacaGAAGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCGGTAAGTTCTACCCGCTGCAt                >  2:1444148‑M1/15‑101 (MQ=255)
                                                                                       tggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCGGTAAGTTCTACCCGCTGCATa               <  2:1332480‑M1/88‑1 (MQ=255)
                                                                                        ggggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCGGTAAGTTCTACCCGCTGCATAc              >  1:672889‑M1/13‑101 (MQ=255)
                                                                                        gcgcAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttga              <  2:1558016‑M1/101‑86 (MQ=255)
                                                                                        gcgcAAAAGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttga              >  2:21928‑M1/1‑16 (MQ=255)
                                                                                         gggtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCGGTAAGTTCTACCCGCTGCATAcc             <  1:737054‑M1/90‑1 (MQ=255)
                                                                                           gtcagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCGGTAAGTTCTACCCGCTGCATACCgg           <  1:536628‑M1/92‑1 (MQ=255)
                                                                                            aaaaGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc          <  2:1315152‑M1/101‑90 (MQ=255)
                                                                                             cagtacaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCGGTAAGTTCTACCCGCTGCATACCGGAc         <  1:1123283‑M1/94‑1 (MQ=255)
                                                                                             aaaGCTGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcg         <  1:1206043‑M1/101‑91 (MQ=255)
                                                                                                 acaGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCGGTAAGTTCTACCCGCTGCATACCGGACatat     <  1:1341712‑M1/98‑1 (MQ=255)
                                                                                                  tGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaat    <  1:1314846‑M1/101‑96 (MQ=255)
                                                                                                  tGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaat    >  1:939391‑M1/1‑6 (MQ=255)
                                                                                                  tGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaat    <  1:1501193‑M1/101‑96 (MQ=255)
                                                                                                  tGGAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcaccttgaagtcgtgaat    <  1:1157004‑M1/101‑96 (MQ=255)
                                                                                                  caGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCGGTAAGTTCTACCCGCTGCATACCGGACATATc    <  1:1421668‑M1/99‑1 (MQ=255)
                                                                                                    gAGGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatca  <  2:105187‑M1/101‑98 (MQ=255)
                                                                                                    |                                                                                                    
CTGCACGCTACAGCAGGTGGCTGATGCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACCATTGGTGTGGTATTCGGTAAGTTCTACCCGCTGCATACCGGACATATCTA  >  142/5475‑5675

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.