| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 131 | 1 = | 0 (0.000) | 63 (0.950) | 49/200 | 0.5 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 223 | = 698 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTT > 131/1‑100 | cagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGAt < 1:821522‑M1/19‑1 (MQ=255) agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATa > 1:636644‑M1/82‑101 (MQ=255) agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATa < 2:258253‑M1/20‑1 (MQ=255) gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATAc > 1:234541‑M1/81‑101 (MQ=255) gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATAc > 1:1211484‑M1/81‑101 (MQ=255) gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATAc < 1:1268365‑M1/21‑1 (MQ=255) gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACt > 1:205291‑M1/75‑101 (MQ=255) caggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTAt > 1:1360699‑M1/72‑101 (MQ=255) aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATc < 1:278446‑M1/31‑1 (MQ=255) aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATc < 2:150275‑M1/31‑1 (MQ=255) ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATcc > 2:520924‑M1/70‑101 (MQ=255) ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGa < 1:1645072‑M1/36‑1 (MQ=255) ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGa < 2:381677‑M1/36‑1 (MQ=255) gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGAt < 1:751701‑M1/37‑1 (MQ=255) agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTAt > 2:653317‑M1/62‑101 (MQ=255) gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATc < 1:89909‑M1/41‑1 (MQ=255) gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATc < 2:454132‑M1/41‑1 (MQ=255) gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATc > 2:658545‑M1/61‑101 (MQ=255) atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTgg < 2:417251‑M1/45‑1 (MQ=255) atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTgg > 1:1250977‑M1/57‑101 (MQ=255) atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTgg > 1:800919‑M1/57‑101 (MQ=255) gaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCa > 1:248065‑M1/54‑101 (MQ=255) aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCAt > 1:395935‑M1/53‑101 (MQ=255) aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATc < 1:768753‑M1/50‑1 (MQ=255) aagccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAat > 1:1642001‑M1/47‑101 (MQ=255) agccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAata > 2:159825‑M1/46‑101 (MQ=255) ccactggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATAtt > 2:490578‑M1/44‑101 (MQ=255) tggagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTc < 1:285955‑M1/62‑1 (MQ=255) gagcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCAt > 2:576252‑M1/38‑101 (MQ=255) gcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATAc < 2:1269715‑M1/66‑1 (MQ=255) gcacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATAc > 1:443925‑M1/36‑101 (MQ=255) cacctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACt > 2:1638360‑M1/35‑101 (MQ=255) ctcaaaaaccccatcaaacactaaatcagtaAGTTGGCAGGATCACCGATTCGCTACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTc > 2:1081981‑M1/32‑101 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTc < 1:1182990‑M1/70‑1 (MQ=255) tcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCt > 2:589198‑M1/31‑101 (MQ=255) tcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCt < 2:767309‑M1/71‑1 (MQ=255) tcaaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCt > 1:1686786‑M1/31‑101 (MQ=255) aaaaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTgg < 2:1524270‑M1/73‑1 (MQ=255) aaacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGta < 2:67078‑M1/75‑1 (MQ=255) aacaccatcatacactaaatcagtaAGTTGGCAGCATCAGCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGtat < 2:235294‑M1/76‑1 (MQ=255) aacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGtat > 2:515702‑M1/26‑101 (MQ=255) aacaccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGtat > 2:249051‑M1/26‑101 (MQ=255) accatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATAcc < 2:288284‑M1/79‑1 (MQ=255) accatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATAcc > 1:179228‑M1/23‑101 (MQ=255) ccatcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCg > 2:1513223‑M1/22‑101 (MQ=255) atcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGcc < 1:1069780‑M1/82‑1 (MQ=255) atcatacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGcc < 2:1316425‑M1/82‑1 (MQ=255) atacactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGc < 2:1337444‑M1/85‑1 (MQ=255) cactaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAAt < 2:698739‑M1/88‑1 (MQ=255) ctaaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGc > 2:1182985‑M1/12‑101 (MQ=255) aaatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAg > 1:715854‑M1/10‑101 (MQ=255) aatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAgg > 1:1164639‑M1/9‑101 (MQ=255) aatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAgg > 1:680623‑M1/9‑101 (MQ=255) aatcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAgg > 2:1232517‑M1/9‑101 (MQ=255) tcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGc < 2:849735‑M1/95‑1 (MQ=255) tcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGc > 2:1069775‑M1/7‑101 (MQ=255) tcagtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGc < 1:1484815‑M1/95‑1 (MQ=255) agtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGt < 2:1252593‑M1/97‑1 (MQ=255) agtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGt < 1:1294475‑M1/97‑1 (MQ=255) agtaAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGt < 1:319304‑M1/97‑1 (MQ=255) taAGTTGGCAGCATCACTGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGttt > 2:723947‑M1/3‑101 (MQ=255) taAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGttt > 2:1248725‑M1/3‑101 (MQ=255) aAGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGtttt > 1:861150‑M1/2‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGTTGGCAGCATCACCGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTT > 131/1‑100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |