| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 13 | = 52198 | 0 (0.000) | 52 (0.820) +AAAAT |
41/190 | 0.7 | 71.8% | intergenic (–/–) | –/– | –/– |
| ? | 28 | 36755 = | 43 (0.650) | intergenic (–/–) | –/– | –/– | |||||
CCTGATTGCATTGATGATTTGGCATTAAGCACTTCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 13/52099‑52198 | ccTGATTGCATTGATGATTTGGCATTAAGCACTTCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCa > 2:997347‑M1/1‑100 (MQ=255) cTGATTGCATTGATGATTTGGCATTAAGCACTTCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaa > 1:900823‑M1/1‑99 (MQ=255) tGATTGCATTGATGATTTGGCATTAAGCACTTCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaa < 1:32526‑M1/101‑4 (MQ=255) tGATTGCATTGATGATTTGCCATTAAGCACTTCAGCAATAATAACGCAAAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaa < 2:304252‑M1/101‑4 (MQ=255) tGCATTGATGATTTGGCATTAAGCACTTCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattg > 1:425538‑M1/1‑94 (MQ=255) cATTGATGATTTGGCATTAAGCACTTCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcc > 2:1480511‑M1/1‑92 (MQ=255) aTTGATGATTTGGCATTAAGCACTTCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcct < 1:957933‑M1/101‑11 (MQ=255) aTTGATGATTTGGCATTAAGCACTTCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcct > 2:647256‑M1/1‑91 (MQ=255) aTTGATGATTTGGCATTAAGCACTTCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcct > 2:545255‑M1/1‑91 (MQ=255) gatgatTTGGCATTAAGCACTTCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgat < 2:569198‑M1/101‑14 (MQ=255) atgatTTGGCATTAAGCACTTCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatg > 2:239053‑M1/1‑87 (MQ=255) atTTGGCATTAAGCACTTCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgc > 1:170099‑M1/1‑84 (MQ=255) tAAGCACTTCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttat < 2:1433212‑M1/101‑27 (MQ=255) tAAGCACTTCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttat < 1:345424‑M1/101‑27 (MQ=255) gCACTTCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcag < 2:1102134‑M1/101‑30 (MQ=255) aCTTCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggc > 1:1448233‑M1/1‑70 (MQ=255) cTTCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcc > 2:901002‑M1/1‑69 (MQ=255) cTTCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcc < 1:1400716‑M1/101‑33 (MQ=255) ttCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcct < 1:998541‑M1/101‑34 (MQ=255) tCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggccta < 1:1543445‑M1/101‑35 (MQ=255) cAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctac > 2:1553637‑M1/1‑66 (MQ=255) aGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAAGGCaaaattgcctgacgtgctagtcgtatcagtcctaca > 2:1024530‑M1/1‑65 (MQ=255) aGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctaca < 1:327700‑M1/101‑37 (MQ=255) cAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacata > 1:1053689‑M1/1‑63 (MQ=255) cAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacata < 2:350377‑M1/101‑39 (MQ=255) aataatAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataa > 1:1124887‑M1/1‑62 (MQ=255) aataatAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataa > 2:553642‑M1/1‑62 (MQ=255) aataatAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataa < 2:1538889‑M1/101‑40 (MQ=255) aataatAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataa > 1:1394327‑M1/1‑62 (MQ=255) taataaCGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatc < 1:1072426‑M1/101‑42 (MQ=255) gCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaa > 1:874598‑M1/1‑53 (MQ=255) cATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaat > 2:1043231‑M1/1‑52 (MQ=255) cATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaat < 2:685506‑M1/101‑50 (MQ=255) tAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatct > 2:206661‑M1/1‑50 (MQ=255) aaaaaaGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctat > 1:1351094‑M1/1‑48 (MQ=255) aaaaaGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctatt < 2:1304206‑M1/101‑55 (MQ=255) aaaaaGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctatt > 2:1349194‑M1/1‑47 (MQ=255) aaaGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctattga < 1:1163119‑M1/101‑57 (MQ=255) aaGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctattgaa < 2:643929‑M1/101‑58 (MQ=255) aGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctattgaat < 2:1594821‑M1/101‑59 (MQ=255) cGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctattgaattt > 1:1249661‑M1/1‑41 (MQ=255) ccAGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctattgaatttgcat < 2:1333760‑M1/101‑65 (MQ=255) aGTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctattgaatttgcatgt > 2:800756‑M1/1‑35 (MQ=255) gTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctattgaatttgcatgtt < 2:510924‑M1/101‑68 (MQ=255) gTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctattgaatttgcatgtt > 2:489250‑M1/1‑34 (MQ=255) gTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctattgaatttgcatgtt > 2:726437‑M1/1‑34 (MQ=255) gTAAACTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctattgaatctgcatgtt > 2:734213‑M1/1‑34 (MQ=255) aaCTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctattgaatttgcatgttttt > 2:748482‑M1/1‑31 (MQ=255) aCTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctattgaatttgcatgtttttg > 1:1156837‑M1/1‑30 (MQ=255) aCTGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctattgaatttgcatgtttttg < 1:1154187‑M1/101‑72 (MQ=255) tGACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctattgaatttgcatgtttttgta > 2:1285674‑M1/1‑28 (MQ=255) gACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctattgaatttgcatgtttttgtag < 1:1559448‑M1/101‑75 (MQ=255) gACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctattgaatttgcatgtttttgtag < 2:1124882‑M1/101‑75 (MQ=255) gACCCGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctattgaatttgcatgtttttgtag < 2:23513‑M1/101‑75 (MQ=255) cccGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctattgaatttgcatgtttttgtaggc < 2:641059‑M1/101‑77 (MQ=255) cccGCTCGAGACTGATTACAAACGCaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctattgaatttgcatgtttttgtaggc > 2:1364166‑M1/1‑25 (MQ=255) | CCTGATTGCATTGATGATTTGGCATTAAGCACTTCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGAGACTGATTACAAACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 13/52099‑52198 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |