| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 124 | = 13852 | 0 (0.000) | 36 (0.710) +CGGATGCGGCGTGAACGCCTTATC |
15/152 | 2.4 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 66 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
TGCTGGCGCATCTTATCAGGCCTGCGGGGTGTGTAGCGGGTGTAGGCCGGATAAGGCGCGTCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 124/13756‑13852 | tGCTGGCGCATCTTATCAGGCCTGCGGGGTGTGCAGCGGGTGTAGGCCGGATAAGGCGCGTCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGcgga > 1:163802‑M1/1‑97 (MQ=255) gCTGGCGCATCTTATCAGGCCTGCGGGGTGTGTAGCGGGTGTAGGCCGGATAAGGCGCGTCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGcggat < 1:593008‑M1/101‑6 (MQ=255) gCTGGCGCATCTTATCAGGCCTGCGGGGTGTGTAGCGGGTGTAGGCCGGATAAGGCGCGTCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGcggat < 2:1340785‑M1/101‑6 (MQ=255) cTGGCGCATCTTATCAGGCCTGCGGGGTGTGTAGCGGGTGTAGGCCGGATAAGGCGCGTCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGcggatg < 2:980198‑M1/101‑7 (MQ=255) tGGCGCATCTTATCAGGCCTGCGGGGTGTGTAGCGGGTGTAGGCCGGATAAGGCGCGTCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGcggatgc < 1:350100‑M1/101‑8 (MQ=255) tGGCGCATCTTATCAGGCCTGCGGGGTGTGTAGCGGGTGTAGGCCGGATAAGGCGCGTAAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGcggatgc < 1:1625450‑M1/101‑8 (MQ=255) ggCGCATCTTATCAGGCCTGCGGGGTGTGCAGCGGGTGTAGGCCGGATAAGGCGCGTCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGcggaaggg > 2:606623‑M1/1‑93 (MQ=255) gaccatcTTGTTAGGCCTGCGGGTTGTGTTGAGGGTGTAGGCCGGATAAGTTGCGTCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGcggatgcgg < 2:818846‑M1/98‑10 (MQ=255) cgcATCTTATCAGGCCTGCGGGGTGTGTAGCGGGTGTAGGCCGGATAAGGCGCGTCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGcggatgcggc > 1:783685‑M1/1‑91 (MQ=255) cATCTTATCAGGCCTGCGGGGTGTGTAGCGGGTGTAGGCCGGATAAGGCGCGTCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGcggatgcggcga > 1:917244‑M1/1‑89 (MQ=255) aTCTTATCAGGCCTGCGGGGTGTGTAGCGGGTGTAGGCCGGATAAGGCGCGTCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGcggatgcggcgat > 1:1428458‑M1/1‑88 (MQ=255) cTTATCAGGCCTGCGGGGTGTGTAGCGGGTGTAGGCCGGATAAGGCGCGTCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGcggatgcggcgatta < 1:1303854‑M1/101‑16 (MQ=255) aGGCCTGCGGGGTGTGTAGCGGGTGTAGGCCGGATAAGGCGCGTCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGcggatgcggcgattaatccag < 1:474786‑M1/101‑22 (MQ=255) aatcctcctggccggataaaACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcg < 1:1485807‑M1/92‑40 (MQ=255) aatcctcctggccggataaaACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcg > 2:660680‑M1/10‑62 (MQ=255) aatcctcctggccggataaaACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcg > 2:1163358‑M1/10‑62 (MQ=255) aatcctcctggccggataaaACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcg < 2:107967‑M1/92‑40 (MQ=255) tcctggccggATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcgttccc > 1:1386664‑M1/5‑57 (MQ=255) ctggccGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcgttcccgt > 1:136534‑M1/3‑55 (MQ=255) ggCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcgttcccgtag > 1:1207585‑M1/1‑53 (MQ=255) ggCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcgttcccgtag < 2:799310‑M1/101‑49 (MQ=255) gCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcgttcccgtagg < 1:682173‑M1/101‑50 (MQ=255) ggATAACACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcgttcccgtaggtcg < 2:825653‑M1/101‑53 (MQ=255) taaaacgcggcaagCGTTGCATCCGGCAACTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcgttcccgtaggtcggat > 1:388203‑M1/6‑46 (MQ=255) aaaacgcggcaaGCGTTGCATCCGGCAACTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcgttcccgtaggtcggata > 2:1490661‑M1/5‑45 (MQ=255) aaacgcggcaAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcgttcccgtaggtcggataa < 2:165866‑M1/98‑58 (MQ=255) gacgcgacAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcaatccccccggccggataaa > 2:67942‑M1/3‑43 (MQ=255) aacgcggcAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcgttcccgtaggtcggataag < 1:1703037‑M1/99‑59 (MQ=255) acgcgaCAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcaatcccccaggccggataaaa < 1:69504‑M1/100‑60 (MQ=255) cgcgACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcaatcccccaggccggataaaac < 1:1317084‑M1/101‑61 (MQ=255) gacaaGCGTCGCATCCGGCATCTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcaatcccccaggccggataaaacacg < 1:989530‑M1/99‑64 (MQ=255) gacaaGCGTCGCATCCGGCATCTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcaatcccccaggccggataaaacacg < 2:814304‑M1/99‑64 (MQ=255) gcaAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcgttcccgtaggtcggataagaagcga > 2:1584319‑M1/2‑37 (MQ=255) acaAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcaatcccccaggccggataaaacacgg > 1:1182973‑M1/2‑37 (MQ=255) aaGCGTTGCATCCGGCAACTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcgttcccgtaggtcggataagacgcgaca < 2:1144464‑M1/101‑67 (MQ=255) aGCGTCGCATCCGGCATCTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcaatcccccaggccggataaaatcgttata < 2:338302‑M1/101‑68 (MQ=255) aGCGTCGCATCCGGCATCTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcaatcccccaggccggataaaacacggcaa > 2:625096‑M1/1‑34 (MQ=255) gTCGCATCCGGCATCTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcaatcccccaggccggataaaacacggcaagcg > 1:271624‑M1/1‑31 (MQ=255) gCATCCGGCATCTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcaatcccccaggccggataaaacacggcaaacgtcg > 2:799966‑M1/1‑28 (MQ=255) aTCCGGCAACTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcgttcccgtaggtcggataagacgcgacaagcgtcgca > 1:1614749‑M1/1‑26 (MQ=255) tCCGGCATCTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcaatcccccaggccggataaaacacggcaagcgtctcat < 1:1410598‑M1/101‑77 (MQ=255) tCCGGCATCTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcaatcccccaggccggataaaacacggcaagcgtcgcat < 1:659946‑M1/101‑77 (MQ=255) ggCAACTGCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcgttcccgtaggtcggataagacgcgacaagcgtcgcctccg > 2:481358‑M1/1‑22 (MQ=255) catctgcacCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcaatcccccaggccggataaaacacggcaagcgtcgcatccggc > 1:4610‑M1/5‑20 (MQ=255) catctgcacCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgggcaatcccccaggccggataaaacacggcaagcggcgcatccggc > 2:1664903‑M1/5‑20 (MQ=255) atctgcaCCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcaatcccccaggccggataaaacacggcaagcgtcgcatccggcg > 2:1159306‑M1/4‑19 (MQ=255) gCACCGCGCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcaatcccccaggccggataaaacacggcaagcgtcgcatccggcgttac < 1:459013‑M1/101‑87 (MQ=255) cgcgCCACTGGcggatgcggcgtgaacgccttatccgccctacatgtgcaatcccccaggccggataaaacacggcaagcgtcgcatccggcgttaccacc > 2:35147‑M1/1‑11 (MQ=255) gcggatgcggcgtgaacgccttatccgccctacatgtgcaatcccccaggccggataaaacacggcaagcgtcgcatccggcgttaccaccgggcgtattc < 1:570796‑M1/101‑101 (MQ=255) | TGCTGGCGCATCTTATCAGGCCTGCGGGGTGTGTAGCGGGTGTAGGCCGGATAAGGCGCGTCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 124/13756‑13852 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |