New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 121 = 141060 (0.000)51 (0.910)
+GGTGATGCTGCCAACT
39/168 0.3 100% intergenic (–/–) –/– –/–
?223 = 698 0 (0.000)intergenic (–/–) –/– –/–

GCAAATGTCACACCGGCTATCTATTACATGAGTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  121/14006‑14106
                                                                                                    |                                                                                                 
gCAAATGTCACACCGGCTATCTATTACATGAGTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGaa                                                                                                   >  2:347426/1‑101 (MQ=255)
 aaaatGTCACACCGGCTATCTATTACATGAGTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAg                                                                                                  <  1:1014765‑M1/100‑2 (MQ=255)
   aaTGTCGCACCGGCTATCTATTACATGAGTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggt                                                                                                <  1:61551‑M1/101‑4 (MQ=255)
   aaTGTCACACCGGCTATCTATTACATGAGTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggt                                                                                                <  1:538741‑M1/101‑4 (MQ=255)
     tGTCACACCGGCTATCTATTACATGAGTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtga                                                                                              >  1:610854‑M1/1‑96 (MQ=255)
      gTCACACCGGCTATCTATTACATGAGTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgat                                                                                             <  2:313235‑M1/101‑7 (MQ=255)
                 tatctatTACATGAGTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaactt                                                                                  >  1:1422997‑M1/1‑84 (MQ=255)
                 tatctatTACATGAGTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaactt                                                                                  >  2:653464‑M1/1‑84 (MQ=255)
                 tatctatTACATGAGTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaactt                                                                                  >  1:798610‑M1/1‑84 (MQ=255)
                 tatctatTACATGAGTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaactt                                                                                  >  2:563625‑M1/1‑84 (MQ=255)
                   tctatTACATGAGTAAGGAAAATCCGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACCCTTAATATCATTATGGGGAAggtgatgctgccaacttac                                                                                <  2:1540532‑M1/101‑20 (MQ=255)
                    ctatTACATGAGTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttact                                                                               >  2:374065‑M1/1‑81 (MQ=255)
                    ctatTACATGAGTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttact                                                                               <  1:1694328‑M1/101‑21 (MQ=255)
                    ctatTACATGAGTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttact                                                                               <  1:1627662‑M1/101‑21 (MQ=255)
                         aCATGAGTAAGTAAAATACGCTAAAACAGGCCGGGGGGGTGCCGGCGCAGAAAACGCTTAATATCATTATGGGGAAggagatgctgccaaattactgattt                                                                          >  2:157026‑M1/1‑76 (MQ=255)
                         aCATGAGTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgattt                                                                          >  1:1072742‑M1/1‑76 (MQ=255)
                          cATGAGTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgattta                                                                         <  1:984891‑M1/101‑27 (MQ=255)
                               gTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgta                                                                    >  2:1385064‑M1/1‑70 (MQ=255)
                               gTAAGGAAAATACGCTACAACAGGCCGTGGGGGTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggcgatgctgccaacttactgatttagtgta                                                                    >  1:1210090‑M1/1‑70 (MQ=255)
                                 aaGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatg                                                                  <  1:737771‑M1/101‑34 (MQ=255)
                                 aaGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatg                                                                  <  2:1039699‑M1/101‑34 (MQ=255)
                                  aGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatga                                                                 >  1:1520693‑M1/1‑67 (MQ=255)
                                    gAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatg                                                               <  1:965356‑M1/101‑37 (MQ=255)
                                      aaaTACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggt                                                             >  1:952394‑M1/1‑63 (MQ=255)
                                       aaTACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtg                                                            >  1:349054‑M1/1‑62 (MQ=255)
                                        aTACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgt                                                           >  1:346957‑M1/1‑61 (MQ=255)
                                          aCGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgttt                                                         <  2:1131733‑M1/101‑43 (MQ=255)
                                           cGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttt                                                        <  1:1605126‑M1/101‑44 (MQ=255)
                                             cTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttg                                                      >  1:886867‑M1/1‑56 (MQ=255)
                                                  acaGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtg                                                 <  2:1636605‑M1/101‑51 (MQ=255)
                                                   caGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgc                                                >  2:802138‑M1/1‑50 (MQ=255)
                                                    aGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgct                                               >  2:1428147‑M1/1‑49 (MQ=255)
                                                    aGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgct                                               <  2:471347‑M1/101‑53 (MQ=255)
                                                       ccGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcca                                            >  1:312922‑M1/1‑46 (MQ=255)
                                                       ccGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcca                                            >  1:692750‑M1/1‑46 (MQ=255)
                                                        cGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccag                                           >  1:349394‑M1/1‑45 (MQ=255)
                                                        cGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccag                                           >  1:562674‑M1/1‑45 (MQ=255)
                                                         gTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt                                          <  2:610849‑M1/101‑58 (MQ=255)
                                                             ggTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggct                                      <  2:1380111‑M1/101‑62 (MQ=255)
                                                               ttGCCCGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttc                                    <  1:563630‑M1/101‑64 (MQ=255)
                                                                  cccGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgt                                 >  1:571955‑M1/1‑35 (MQ=255)
                                                                  cccGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgt                                 <  1:1684638‑M1/101‑67 (MQ=255)
                                                                  cccGATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgt                                 <  2:1629388‑M1/101‑67 (MQ=255)
                                                                     gATCAGAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttc                              >  2:702027‑M1/1‑32 (MQ=255)
                                                                          gAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatca                         <  1:1385070‑M1/101‑75 (MQ=255)
                                                                          gAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatca                         <  2:571950‑M1/101‑75 (MQ=255)
                                                                          gAAAACGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatca                         >  2:509437‑M1/1‑27 (MQ=255)
                                                                            aaaCGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagc                       >  1:1102377‑M1/1‑25 (MQ=255)
                                                                             aaCGCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagct                      <  2:1593394‑M1/101‑78 (MQ=255)
                                                                                gCTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtc                   <  1:1464856‑M1/101‑81 (MQ=255)
                                                                                 cTTAATATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtcc                  >  1:64945‑M1/1‑20 (MQ=255)
                                                                                    aaTATCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctc               >  1:536653‑M1/1‑17 (MQ=255)
                                                                                     atatCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcc              >  2:1085238‑M1/1‑16 (MQ=255)
                                                                                      tatCATTATGGGGAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcct             >  2:1608759‑M1/1‑15 (MQ=255)
                                                                                               ggggAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagcta    >  1:789124‑M1/1‑6 (MQ=255)
                                                                                               ggggAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagcta    >  1:1137870‑M1/1‑6 (MQ=255)
                                                                                                 ggAAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctact  <  2:704509‑M1/101‑98 (MQ=255)
                                                                                                    |                                                                                                 
GCAAATGTCACACCGGCTATCTATTACATGAGTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  121/14006‑14106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.