| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 116 | = 14374 | 0 (0.000) | 61 (0.920) | 52/200 | 0.2 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 49 | = 29908 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 116/14274‑14374 | gtGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGt > 1:1682236/1‑101 (MQ=255) tGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTa < 2:1677833‑M1/101‑2 (MQ=255) tGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTa < 2:260386‑M1/101‑2 (MQ=255) cgcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagc > 2:1149230‑M1/1‑98 (MQ=255) cgcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagc > 1:128945‑M1/1‑98 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcg < 2:544724‑M1/101‑5 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcg < 2:373172‑M1/101‑5 (MQ=255) ttgttgATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcat < 1:250593‑M1/101‑8 (MQ=255) ttgttgATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcat > 1:841766‑M1/1‑94 (MQ=255) tgATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcagg < 1:1040689‑M1/101‑12 (MQ=255) tGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaa > 2:1403926‑M1/1‑87 (MQ=255) tGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaa > 2:1651291‑M1/1‑87 (MQ=255) gCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCGCTTGTAGGCCTGATAAGCGTagcgcatcaggcaat < 1:465046‑M1/101‑16 (MQ=255) gCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaat < 1:995809‑M1/101‑16 (MQ=255) ccGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatt > 2:939535‑M1/1‑85 (MQ=255) cGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaattt > 1:1358574‑M1/1‑84 (MQ=255) gcggcgCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgt < 2:469659‑M1/101‑23 (MQ=255) cggcgCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtt < 2:30949‑M1/101‑24 (MQ=255) cggcgCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtt > 1:333287‑M1/1‑78 (MQ=255) gcgcGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttg < 1:620247‑M1/101‑26 (MQ=255) gcgcGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttg > 2:506968‑M1/1‑76 (MQ=255) cgcgAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgt < 1:171446‑M1/101‑27 (MQ=255) gAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcat < 1:388325‑M1/101‑30 (MQ=255) aGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatc > 2:1418379‑M1/1‑71 (MQ=255) aGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatc < 1:634654‑M1/101‑31 (MQ=255) aGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatc < 1:1008523‑M1/101‑31 (MQ=255) ccTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtc > 1:115842‑M1/1‑67 (MQ=255) ccTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtc > 2:704777‑M1/1‑67 (MQ=255) ttATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctc < 1:699855‑M1/101‑37 (MQ=255) ttATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctc > 2:516207‑M1/1‑65 (MQ=255) tATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctca > 2:111567‑M1/1‑64 (MQ=255) tCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcagg < 2:1266333‑M1/101‑40 (MQ=255) gTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccg > 2:1652267‑M1/1‑59 (MQ=255) tCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgg > 1:1632608‑M1/1‑58 (MQ=255) ccTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcttcagtctcaggccggg > 2:1002304‑M1/1‑57 (MQ=255) cTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggt > 2:1146596‑M1/1‑56 (MQ=255) aCAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgg < 1:1403932‑M1/101‑48 (MQ=255) cAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttgtcctttgtcatcagtctcaggccgggtggg < 2:762620‑M1/101‑49 (MQ=255) cAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtggg < 2:217270‑M1/101‑49 (MQ=255) aaaaCATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggt > 2:918893‑M1/1‑52 (MQ=255) aaaaCATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggt < 1:1050138‑M1/101‑50 (MQ=255) aaaCATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggta < 1:1701676‑M1/101‑51 (MQ=255) cATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggtaata < 2:276218‑M1/101‑54 (MQ=255) cATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggtaata < 1:1418385‑M1/101‑54 (MQ=255) aaaTTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggtaataccatcc < 2:1587226‑M1/101‑60 (MQ=255) aTTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggtaataccatccgg > 1:1051870‑M1/1‑40 (MQ=255) cAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggtaataccatccggcca > 2:852563‑M1/1‑37 (MQ=255) cAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggtaataccatccggcca < 1:98350‑M1/101‑65 (MQ=255) tAGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggtaataccatccggccattt > 2:819384‑M1/1‑34 (MQ=255) aGATTGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggtaataccatccggccatttt > 1:4081‑M1/1‑33 (MQ=255) tGCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggtaataccatccggccattttcatt < 2:1104568‑M1/101‑73 (MQ=255) gCAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggtaataccatccggccattttcattt > 1:5894‑M1/1‑28 (MQ=255) cAATGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggtaataccatccggccattttcattta > 2:1332351‑M1/1‑27 (MQ=255) aaTGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggtaatagcatccggccattttcatttaa > 2:946782‑M1/1‑26 (MQ=255) aTGCACTTGTAGGCCTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggtaataccatccggccattttcatttaag > 1:507800‑M1/1‑25 (MQ=255) ccTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggtaataccatccggccattttcatttaagccacttccagcac < 1:1652273‑M1/101‑90 (MQ=255) ccTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggtaataccatccggccattttcatttaagccacttccagcac > 1:1319315‑M1/1‑12 (MQ=255) cTGATAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggtaataccatccggccattttcatttaagccacttccagcact > 1:147583‑M1/1‑11 (MQ=255) aTAAGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggtaataccatccggccattttcatttaagccacttccagcacttct > 2:584119‑M1/1‑8 (MQ=255) tAAGAGTagcgcatcagggaatttggcgtttgtcatcaggctcaggccgggtgggtaataccatccggccattttcatttaagccacttccagcacttctt < 2:714437‑M1/101‑95 (MQ=255) aaGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggtaataccatccggccattttcatttaagccacttccagcacttcttt < 2:235697‑M1/101‑96 (MQ=255) aGCGTagcgcatcaggcaatttggcgtttgtcatcagtctcaggccgggtgggtaataccatccggccattttcatttaagccacttccagcacttctttt < 2:1682230‑M1/101‑97 (MQ=255) | GTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 116/14274‑14374 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |