New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	115	= 14429	0 (0.000)	38 (0.660)	28/172	1.4	76.8%	intergenic (–/–)	–/–	–/–
	?	135	12618 =	23 (0.400)					intergenic (–/–)	–/–	–/–

GACGATTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  115/14329‑14429                                                                                                     |                                                             gACGATTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGC                                                              <  1:211752‑M1/101‑1 (MQ=255)    gATTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgcc                                                           >  2:955651‑M1/1‑98 (MQ=255)     aTTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCTCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgcca                                                          <  1:1561225‑M1/101‑5 (MQ=255)      tttGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccag                                                         >  2:1059223‑M1/1‑96 (MQ=255)       ttGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagc                                                        >  1:185960‑M1/1‑95 (MQ=255)         ggggAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgt                                                      <  1:633822‑M1/101‑9 (MQ=255)           ggAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcg                                                    >  1:1719799‑M1/1‑91 (MQ=255)             aaaCCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgca                                                  <  1:214487‑M1/101‑13 (MQ=255)              aaCCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcat                                                 >  1:402923‑M1/1‑88 (MQ=255)              aaCCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcat                                                 >  2:709302‑M1/1‑88 (MQ=255)                  gTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccgg                                             >  1:150583‑M1/1‑84 (MQ=255)                  gTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccgg                                             >  1:1663887‑M1/1‑84 (MQ=255)                   tATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggc                                            >  1:895907‑M1/1‑83 (MQ=255)                   tATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggc                                            >  2:799889‑M1/1‑83 (MQ=255)                    aTCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggca                                           <  2:788689‑M1/101‑20 (MQ=255)                     tCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcat                                          <  1:937968‑M1/101‑21 (MQ=255)                      ccGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcatt                                         >  2:1346725‑M1/1‑80 (MQ=255)                           gCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcattttttt                                    >  2:1004253‑M1/1‑75 (MQ=255)                            cTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcatttttttc                                   >  1:866215‑M1/1‑74 (MQ=255)                             tGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcatttttttct                                  <  2:915655‑M1/101‑29 (MQ=255)                             tGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcatttttttct                                  <  1:1206863‑M1/101‑29 (MQ=255)                              gAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcatttttttctg                                 <  1:1703246‑M1/101‑30 (MQ=255)                              gAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcatttttttctg                                 <  2:574450‑M1/101‑30 (MQ=255)                               aaTCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcatttttttctgc                                >  2:1709634‑M1/1‑71 (MQ=255)                                aTCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcatttttttctgcg                               <  1:1335435‑M1/101‑32 (MQ=255)                                       gTATGCGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcatttttttctgcgctaatga                        >  2:397924‑M1/1‑63 (MQ=255)                                          tgtgGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcatttttttctgcgccaatgcaaa                     <  1:667517‑M1/101‑42 (MQ=255)                                          tgtgGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcatttttttctgcgccaatgcaaa                     <  2:1357901‑M1/101‑42 (MQ=255)                                              ggggAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcatttttttctgcgccaatgcaaaaagg                 <  2:192505‑M1/101‑46 (MQ=255)                                               gggAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcatttttttctgcgccaatgcaaaaaggc                >  2:801460‑M1/1‑55 (MQ=255)                                                 gAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcatttttttctgcgccaatgcaaaaaggcca              >  1:1641148‑M1/1‑53 (MQ=255)                                                 gAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcatttttttctgcgccaatgcaaaaaggcca              <  1:1347603‑M1/101‑49 (MQ=255)                                                   aTAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCcccagcgtcgcatccggcatttttttctgcgccaatgcaaaaaggccatc            >  1:229663‑M1/1‑51 (MQ=255)                                                     aaGCCGCTCCCTGTCGTGCTATCGTGCCTGCGTCAGCTGGATAAGACGCgccagcgtcgcatccggcatttttttctgcgccaatgcaaaaaggccatcct          <  2:379300‑M1/101‑53 (MQ=255)                                                     aaGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcatttttttctgcgccaatgcaaaaaggccatcct          <  1:984145‑M1/101‑53 (MQ=255)                                                      aGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcatttttttctgcgccaatgcaaaaaggccatcctg         <  2:701799‑M1/101‑54 (MQ=255)                                                        ccgccCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcatttttttctgcgccaatgcaaaaaggccatcctgac       <  1:1613527‑M1/101‑56 (MQ=255)                                                        ccgccCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcatttttttctgcgccaatgcaaaaaggccatcctgac       <  1:799894‑M1/101‑56 (MQ=255)                                                             cccTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGCgccagcgtcgcatccggcatttttttctgcgccaatgcaaaaaggccatcctgacggctg  >  2:50146‑M1/1‑41 (MQ=255)                                                                                                     |                                                             GACGATTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGAATAAGCCGCCCCCTATCGTGCTATCGTGCCTGCGTAAGCTGGATAAGACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  115/14329‑14429

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.