| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 113 | 1 = | 0 (0.000) | 53 (0.950) | 42/168 | 0.2 | 62.0% | intergenic (–/–) | –/– | –/– |
| ? | 201 | 953 = | 65 (1.160) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATGACACACAAGACCAGCTAATGTATTT > 113/1‑101 | cacaccgagcacgccacgccggtgggcgcgccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgc < 2:1029849‑M1/1‑1 (MQ=255) acaccgagcacgccacgccggtgggcgcgccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCt > 2:906725‑M1/100‑101 (MQ=255) caccgagcacgccacgccggtgggcgcgccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTg > 2:1493695‑M1/99‑101 (MQ=255) caccgagcacgccacgccggtgggcgcgccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTg < 1:124045‑M1/3‑1 (MQ=255) ccgagcacgccacgccggtgggcgcgccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGt < 2:972704‑M1/5‑1 (MQ=255) agcccgccacgccggtgggcgcgccaattcttacccctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGtttt > 1:197615‑M1/94‑101 (MQ=255) cacgccacgccggtgggcgcgccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTcc > 1:676228‑M1/92‑101 (MQ=255) cacgccacgccggtgggcgcgccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTcc < 1:698159‑M1/10‑1 (MQ=255) acgccacgccggtgggcgcgccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCg < 2:719558‑M1/11‑1 (MQ=255) gccacgccggtgggcgcgccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCt < 1:894850‑M1/13‑1 (MQ=255) cacgccggtgggcgcgccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCa > 1:1285637‑M1/87‑101 (MQ=255) cacgccggtgggcgcgccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCa < 1:1489521‑M1/15‑1 (MQ=255) cacgccggtgggcgcgccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCa < 1:1056024‑M1/15‑1 (MQ=255) acgccggtgggcgcgccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCat > 2:975471‑M1/86‑101 (MQ=255) acgccggtgggcgcgccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCat > 2:132774‑M1/86‑101 (MQ=255) acgccggtgggcgcgccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCat < 1:448469‑M1/16‑1 (MQ=255) gccggtgggcgcgccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCatat > 1:249739‑M1/84‑101 (MQ=255) gtgggcgcgccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAg > 2:583240‑M1/80‑101 (MQ=255) gtgggcgcgccaattcttacacctgccgaaccctggacaaagggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAg < 2:668169‑M1/22‑1 (MQ=255) tgggcgcgccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGt > 2:1569050‑M1/79‑101 (MQ=255) cgccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCtt > 1:1366714‑M1/73‑101 (MQ=255) gccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCttt < 2:324075‑M1/30‑1 (MQ=255) gccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCttt < 1:71132‑M1/30‑1 (MQ=255) ccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCtttt > 1:614020‑M1/71‑101 (MQ=255) ccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCtttt < 2:856134‑M1/31‑1 (MQ=255) ccaattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCtttt > 2:841366‑M1/71‑101 (MQ=255) aattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAg < 2:712989‑M1/33‑1 (MQ=255) aattcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAg > 1:65105‑M1/69‑101 (MQ=255) attcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGt < 2:1349347‑M1/34‑1 (MQ=255) attcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGt > 2:1280246‑M1/68‑101 (MQ=255) tcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTa < 2:920374‑M1/36‑1 (MQ=255) tcttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTACCCTTTTAGTTa > 1:1290178‑M1/66‑101 (MQ=255) cttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTAt < 2:939994‑M1/37‑1 (MQ=255) ttacacctgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTAtt > 1:800979‑M1/64‑101 (MQ=255) tgccgaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCata > 1:1577785‑M1/57‑101 (MQ=255) gaaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATccc < 2:296781‑M1/49‑1 (MQ=255) aaccctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCt > 2:1160936‑M1/52‑101 (MQ=255) accctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCtg > 1:920379‑M1/51‑101 (MQ=255) accctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCtg > 2:1258248‑M1/51‑101 (MQ=255) ctggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTgtgt < 2:1626829‑M1/54‑1 (MQ=255) ggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTa > 2:436426‑M1/46‑101 (MQ=255) ggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTa > 1:1070761‑M1/46‑101 (MQ=255) ggacaatgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTa > 1:1173971‑M1/46‑101 (MQ=255) atgggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGcaac < 1:487434‑M1/61‑1 (MQ=255) ggggcccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGcaaca > 2:254524‑M1/40‑101 (MQ=255) gggaccgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGcaacaa < 1:579116‑M1/63‑1 (MQ=255) cgccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACaaaaaaa > 1:835084‑M1/34‑101 (MQ=255) gccatactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACaaaaaaaa < 1:266573‑M1/69‑1 (MQ=255) atactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAaaaataa < 2:1110167‑M1/72‑1 (MQ=255) atactgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAaaaataa > 1:1546809‑M1/30‑101 (MQ=255) actgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAaaaataaaa > 1:423725‑M1/28‑101 (MQ=255) tgagtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATg > 2:415242‑M1/26‑101 (MQ=255) agtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATgaa < 2:1293319‑M1/78‑2 (MQ=255) agtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATGac > 2:93724‑M1/24‑101 (MQ=255) agtcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATGac > 1:296781‑M1/24‑101 (MQ=255) tcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATGacac < 2:1120479‑M1/80‑1 (MQ=255) tcatatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATGacac < 1:1149404‑M1/80‑1 (MQ=255) catatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATGacaca < 1:392415‑M1/81‑1 (MQ=255) atatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATGacacac < 1:882745‑M1/82‑1 (MQ=255) atatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATGacacac > 1:1626835‑M1/20‑101 (MQ=255) atatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATGacacac > 2:1132186‑M1/20‑101 (MQ=255) atatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATGacacac < 2:409548‑M1/82‑1 (MQ=255) atatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATGacacac < 2:1574385‑M1/82‑1 (MQ=255) atatctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATGacacac < 2:160366‑M1/82‑1 (MQ=255) atctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATGACACACaa > 2:793452‑M1/18‑101 (MQ=255) tctccctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATGACACACAAg > 1:668174‑M1/17‑101 (MQ=255) cctgacgcgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATGACACACAAGACCa > 1:719563‑M1/13‑101 (MQ=255) cgccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATGACACACAAGACCAGCTAATg < 1:1623923‑M1/96‑1 (MQ=255) ccgCTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATGACACACAAGACCAGCTAATGTa > 2:71132‑M1/4‑101 (MQ=255) CTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATGACACACAAGACCAGCTAATGTAttt < 2:1298770‑M1/101‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTGGTTTTCCGCTCATATAAAGTGCCCTTTTAGTTATTGTTCATATCCCTGTGTTAGCAACAAAAAAAATAAAATGACACACAAGACCAGCTAATGTATTT > 113/1‑101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |