New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 11 = 5186471 (1.070)53 (0.920) 40/172 0.3 63.4% intergenic (–/–) –/– –/–
?144 = 10502 0 (0.000)intergenic (–/–) –/– –/–

Only 100 of 224 total aligned reads displayed.

TGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAAC  >  11/51764‑51964
                                                                                                    |                                                                                                    
tgtgCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTAT                                                                                                      <  2:1604092‑M1/101‑1 (MQ=255)
 gtgCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGtata                                                                                                     >  1:475661/1‑101 (MQ=255)
  tgctgcGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATNATTTAGAGTATga                                                                                                    <  2:381600‑M1/101‑3 (MQ=255)
  tgctgcGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTatat                                                                                                    <  2:969917/101‑1 (MQ=255)
   gctgcGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgac                                                                                                   >  1:1252717‑M1/1‑98 (MQ=255)
    ctgcgtctgcgtTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCTTTCCTGCAACTCGCATTATTTAGAGGATgact                                                                                                  >  2:1303892‑M1/1‑97 (MQ=255)
    ctgcgtctgcgtTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATcc                                                                                                  >  2:1705776/1‑101 (MQ=255)
    ctgcgtctgcgtTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATcc                                                                                                  >  1:667244/1‑101 (MQ=255)
    ctgcgtctgcgtTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATcc                                                                                                  >  1:1329166/1‑101 (MQ=255)
     tgcgtctgcgtTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaa                                                                                                 >  1:1110264‑M1/1‑96 (MQ=255)
      gcgtctgcgtTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgacttt                                                                                                <  1:743560‑M1/101‑7 (MQ=255)
        gtctgcgtTCGCTCACCCCAGTCACTTTCTTATGTAAGCTCCTGGGGATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaatt                                                                                              >  1:29940‑M1/1‑93 (MQ=255)
        gtctgcgtTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaatt                                                                                              <  1:1552679‑M1/101‑9 (MQ=255)
        gtctgcgtTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgactttta                                                                                              >  2:438914‑M1/1‑93 (MQ=255)
        gtctgcgtTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCAttt                                                                                              >  2:1027661/1‑101 (MQ=255)
         tctgcggTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattg                                                                                             >  2:419586‑M1/1‑92 (MQ=255)
            gcgtTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATttatta                                                                                          <  2:264824/101‑1 (MQ=255)
              gtTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgacttttaactcca                                                                                        <  2:187276‑M1/101‑15 (MQ=255)
              gtTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATc                                                                                        >  1:1582282/1‑101 (MQ=255)
                tCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCtt                                                                                      <  1:1642966/101‑1 (MQ=255)
                 cGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgacttttaactccagga                                                                                     >  1:1048209‑M1/1‑84 (MQ=255)
                   cTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaa                                                                                   >  2:797176‑M1/1‑82 (MQ=255)
                       ccccAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgacttttaactccaggagagaat                                                                               <  1:380979‑M1/101‑24 (MQ=255)
                         ccAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgc                                                                             <  1:1603691‑M1/101‑26 (MQ=255)
                          cAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACt                                                                            <  2:1161048/101‑1 (MQ=255)
                           aGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgc                                                                           <  2:1309343‑M1/101‑28 (MQ=255)
                            gTCACTTACTTATGTAAGCTCCTGGGGATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgct                                                                          <  2:1650862‑M1/101‑29 (MQ=255)
                            gTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGAAACTCGAATTATTTAGAGTATgacttttaactccaggagagaataaatg                                                                          >  2:132316‑M1/1‑73 (MQ=255)
                             tCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCa                                                                         <  1:1528243/101‑1 (MQ=255)
                               acttacttATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACg                                                                       <  1:614607/101‑1 (MQ=255)
                                cttacttaTGTAAGCTCCTGGGGATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaa                                                                      >  2:749708‑M1/1‑69 (MQ=255)
                                cttacttaTGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACgg                                                                      >  2:548885/1‑101 (MQ=255)
                                 ttacttaTGTAAGCTCCTGGGGATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaac                                                                     >  2:1194696‑M1/1‑68 (MQ=255)
                                 ttacttaTGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGt                                                                     >  1:732969/1‑101 (MQ=255)
                                    cttaTGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTgcg                                                                  >  2:1541647/1‑101 (MQ=255)
                                      taTGTAAGCTCCTGGGGATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaaggg                                                                >  2:522410‑M1/1‑63 (MQ=255)
                                       aTGTAAGCTCCTGGGGATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggc                                                               >  2:1000223‑M1/1‑62 (MQ=255)
                                       aTGTAAGCTCCTGGGGATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggc                                                               >  2:70938‑M1/1‑62 (MQ=255)
                                       aTGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAg                                                               >  2:815497/1‑101 (MQ=255)
                                        tGTAAGCTCCTGGGGATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggca                                                              <  2:640867‑M1/101‑41 (MQ=255)
                                        tGTAAGCTCCTGGGGATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggca                                                              <  2:1553123‑M1/101‑41 (MQ=255)
                                         gTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGat                                                             <  1:818956/101‑1 (MQ=255)
                                         gTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGat                                                             >  2:1659656/1‑101 (MQ=255)
                                          tAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgacttttaactccaggagagaataaatgaaaaaagcactgca                                                            >  2:298737‑M1/1‑59 (MQ=255)
                                           aaGCTCCTGGGGATTCCCCCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCACACTTCCCGGTGCGCAGatat                                                           <  2:805789/101‑1 (MQ=38)
                                            aGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgacttttaactccaggagagaataaatgaaaaaagcactgcaag                                                          <  1:848866‑M1/101‑45 (MQ=255)
                                             gCTCCTGGGGATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggcaggttt                                                         <  2:318911‑M1/101‑46 (MQ=255)
                                                 cTGGGGATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggcaggtttccct                                                     <  2:1415607‑M1/101‑50 (MQ=255)
                                                  tGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgacttttaactccaggagagaataaatgaaaaaagcactgcaagtcgcaa                                                    >  1:906183‑M1/1‑51 (MQ=255)
                                                   ggggATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggcaggtttccctgc                                                   <  1:251972‑M1/101‑52 (MQ=255)
                                                    gggATTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggcaggtttccctgcc                                                  >  2:92829‑M1/1‑49 (MQ=255)
                                                    gggATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCAt                                                  >  2:1436018/1‑101 (MQ=255)
                                                      gATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgacttttaactccaggagagaataaatgaaaaaagcactgcaagtcgcaatgtt                                                <  2:724717‑M1/101‑55 (MQ=255)
                                                      gATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCAttt                                                <  2:826322/101‑1 (MQ=255)
                                                      gATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCAttt                                                <  2:362737/101‑1 (MQ=255)
                                                       aTTCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggcaggtttccctgccctg                                               <  1:335613‑M1/101‑56 (MQ=255)
                                                        ttCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggcaggtttccctgccctgt                                              >  2:1007575‑M1/1‑45 (MQ=255)
                                                         tCACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggcaggtttccctgccctgtg                                             <  1:70938‑M1/101‑58 (MQ=255)
                                                          cACTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGGATgaaaaattgcgtgctctaacagcgcgctgaaacaagggcaggtttccctgccctgtga                                            >  1:424000‑M1/1‑43 (MQ=255)
                                                           aCTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggcaggtttccctgccctgtgat                                           <  1:1194701‑M1/101‑60 (MQ=255)
                                                           aCTCTCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagcgcaggtttccctgccctgtgat                                           >  1:433477‑M1/1‑42 (MQ=255)
                                                            cTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgacttttaactccaggagagaataaatgaaaaaagcactgcaagtcgcaatgttcagtct                                          >  2:111527‑M1/1‑41 (MQ=255)
                                                              ctcttGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggcaggtttccctgccctgtgatttt                                        <  1:1700130‑M1/99‑63 (MQ=255)
                                                                    tCGCCTTCCTGCAACTCGAATTATTTAGAGTATgacttttaactccaggagagaataaatgaaaaaagcactgcaagtcgcaatgttcagtctgtttaccg                                  >  2:1501740‑M1/1‑33 (MQ=255)
                                                                    tCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTAt                                  >  2:607564/1‑101 (MQ=255)
                                                                      gCCTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggcaggtttccctgccctgtgattttttacttct                                <  1:361837‑M1/101‑71 (MQ=255)
                                                                       ccTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTg                               <  2:1123678/101‑1 (MQ=255)
                                                                        cTTCCTGCAACTCGAATTATTTAGAGTATgacttttaactccaggagagaataaatgaaaaaagcactgcaagtcgcaatgttcagtctgtttaccgttat                              <  1:545335‑M1/101‑73 (MQ=255)
                                                                        cTTCCTGCAACTCGAATTATTTAGAGTATgacttttaactccaggagagaataaatgaaaaaagcactgcaagtcgcaatgttcagtctgtttaccgttat                              <  1:563248‑M1/101‑73 (MQ=255)
                                                                        cTTCCTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggcaggtttccctgccctgtgattttttacttctta                              <  1:630563‑M1/101‑73 (MQ=255)
                                                                          tCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGaaa                            >  2:685126/1‑101 (MQ=255)
                                                                          tCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGaaa                            <  2:1361006/101‑1 (MQ=255)
                                                                          tCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGaaa                            <  1:770185/101‑1 (MQ=255)
                                                                          tCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGaaa                            <  1:141843/101‑1 (MQ=255)
                                                                           ccTGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggcaggtttccctgccctgtgattttttacttcttagcg                           >  2:1612109‑M1/1‑26 (MQ=255)
                                                                            cTGCAACTCGAATTATTTAGAGTATgacttttaactccaggagagaataaatgaaaaaagcactgcaagtcgcaatgttcagtctgtttaccgttattggc                          >  2:1254840‑M1/1‑25 (MQ=255)
                                                                            cTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGaaaaa                          <  1:807855/101‑1 (MQ=255)
                                                                             tGCAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggcaggtttccctgccctgtgattttttacttcttagcgcg                         >  2:1506826‑M1/1‑24 (MQ=255)
                                                                             tGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAg                         <  1:1677336/101‑1 (MQ=255)
                                                                               cAACTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggcaggtttccctgccctgtgattttttacttcttagcgcgct                       >  2:1457155‑M1/1‑22 (MQ=255)
                                                                                  cTCGAATTATTTCTAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggcaggtttccctgccctgtgattttttacttcttagcccgctctt                    >  2:287994‑M1/1‑19 (MQ=255)
                                                                                  cTCGAATTATTTAGAGTATgacttttaactccaggagagaataaatgaaaaaagcactgcaagtctcaatgttcagtctgtttaccgttattggctttaat                    <  2:1614844‑M1/101‑83 (MQ=255)
                                                                                  cTCGAATTATTTAGAGTATgacttttaactccaggagagaataaatgaaaaaagcactgcaagtcgcaatgttcagtctgtttaccgttattggctttaat                    >  1:509197‑M1/1‑19 (MQ=255)
                                                                                  cTCGAATTATTTAGAGTATgacttttaactccaggagagaataaatgaaaaaagcactgcaagtcgcaatgttcagtctgtttaccgttattggctttaat                    <  1:1367266‑M1/101‑83 (MQ=255)
                                                                                  cTCGAATTATTTAGAGTATgacttttaactccaggagagaataaatgaaaaaagcactgcaagtcgcaatgttcagtctgtttaccgttattggctttaat                    <  2:624890‑M1/101‑83 (MQ=255)
                                                                                  cTCGAATTATTTAGAGTATgacttttaactccaggagagaataaatgaaaaaagcactgcaagtcgcaatgttcagtctgtttaccgttattggctttaat                    <  2:17278‑M1/101‑83 (MQ=255)
                                                                                  cTCGAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggcaggtttccctgccctgtgattttttacttcttagcgcgctctt                    <  1:1004280‑M1/101‑83 (MQ=255)
                                                                                  cTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCgtg                    <  1:145219/101‑1 (MQ=255)
                                                                                     gAATTATTTAGAGTATgacttttaactccaggagagaataaatgaaaaaagcactgcaagtcgcaatgtttagtctgtttaccgttattggctttaatgcc                 >  1:1070943‑M1/1‑16 (MQ=255)
                                                                                     gAATTATTTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggcaggtttccctgccctgtgattttttacttcttagcgcgctcttcga                 >  2:502014‑M1/1‑16 (MQ=255)
                                                                                      aaTTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTtc                >  2:128536/1‑101 (MQ=255)
                                                                                        ttattTAGAGTATgacttttaactccaggagagaataaatgaaaaaagcactgcaagtcgcaatgttcagtctgtttaccgttattggctttaatgcccag              >  2:514085‑M1/1‑13 (MQ=255)
                                                                                         tattTAGAGTATgacttttaactccaggagagaataaatgaaaaaagcactgcaagtcgcaatgttcagtctgtttacggttattggctttaatgcccagc             >  1:486968‑M1/1‑12 (MQ=255)
                                                                                         tattTAGAGTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggcaggtttccctgccctgtgattttttacttcttagcgcgctcttcgagcat             <  2:923043‑M1/101‑90 (MQ=255)
                                                                                          attTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGc            >  1:129258/1‑101 (MQ=255)
                                                                                                agTATgaaaaattgcgtgctctaaaagcgcgctgaaacaagggcaggtttccctgccctgtgattttttacttcttagcgcgctcttcgagcatcgctact      <  1:1099787‑M1/101‑97 (MQ=255)
                                                                                                 gTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCCGAAAAAGGCGTGTTTCTCGCCAGtaat     <  2:839101/101‑1 (MQ=255)
                                                                                                  tataTCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGtaata    >  2:459272/1‑101 (MQ=255)
                                                                                                  tATgacttttaactccaggagagaataaatgaaaaaagcactgcaagtcgcaatgttcagtctgtttaccgttattggctttaatgcccaggctaacgaac    >  1:1411749‑M1/1‑3 (MQ=255)
                                                                                                   aTgacttttaactccaggagagaataaatgaaaaaagcactgcaagtcgcaatgttcagtctgtttaccgttattggctttaatgcccaggctaacgaaca   <  2:659518‑M1/101‑100 (MQ=255)
                                                                                                    |                                                                                                    
TGTGCTGCGTCTGCGTTCGCTCACCCCAGTCACTTACTTATGTAAGCTCCTGGGGATTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGCGCAGATATCTGGAGCATTTGATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAAC  >  11/51764‑51964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.