| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 108 | 1 = | 0 (0.000) | 61 (0.960) +CCTGC |
45/190 | 0.4 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 11 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTACTGGTACAGCGTCATTGGCTGTGAGCGTACTGGGCTT > 108/1‑99 | caccttcctgaagctgattctgatgccactggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggcg > 1:1405646‑M1/100‑101 (MQ=255) ccttcctgaagctgattctgatgccactggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggGGCa < 2:125854‑M1/4‑1 (MQ=255) tcctgaagctgattctgatgccactggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTa > 1:496490‑M1/95‑101 (MQ=255) tcctgaagctgattctgatgccactggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTa < 1:90013‑M1/7‑1 (MQ=255) tgaagctgattctgatgccactggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggggcatttcag < 2:1258261‑M1/10‑5 (MQ=255) tgaagctgattctgatgccactggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggGGCATTaccc < 1:1224607‑M1/10‑2 (MQ=255) tgaagctgattctgatgccactggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTAccg < 2:919007‑M1/10‑1 (MQ=255) gaagctgattctgatgccactggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatggtggtactggcaggCGCATTAccgc < 2:1261408‑M1/11‑1 (MQ=255) agctgattctgatgccactggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTAccgccg < 2:672423‑M1/13‑1 (MQ=255) ctgattctgatgccactggcactgcttttctttgggatgtcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggtgcattactgctgga < 2:185387‑M1/15‑8 (MQ=255) tgattctgatgccactggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggGGCATTACCGCCGGCa < 1:804334‑M1/16‑1 (MQ=255) tgattctgatgccactggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCa < 1:956570‑M1/16‑1 (MQ=255) gattctgatgccactggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCAt > 2:1283487‑M1/85‑101 (MQ=255) attctgatgccactggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCAtt < 2:144538‑M1/18‑1 (MQ=255) tctgatgccactggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATtct > 1:788059‑M1/82‑101 (MQ=255) tgatgccactggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTcc > 1:450200‑M1/80‑101 (MQ=255) atgccactggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCgg < 1:6408‑M1/24‑1 (MQ=255) ccactggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggGGCGTTACCGCCGGCGTTCTCCGGAAt < 2:1029642‑M1/27‑1 (MQ=255) ccactggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAAt > 1:724789‑M1/75‑101 (MQ=255) ctggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCat < 2:1037012‑M1/30‑1 (MQ=255) ctggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCat < 2:1647‑M1/30‑1 (MQ=255) tggcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCatt > 2:283316‑M1/71‑101 (MQ=255) gtcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCatta > 2:639239‑M1/70‑101 (MQ=255) gcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCattat < 2:473686‑M1/33‑1 (MQ=255) gcactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCattat < 1:1380830‑M1/33‑1 (MQ=255) cactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCattatt > 1:638199‑M1/68‑101 (MQ=255) cactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCattatt > 1:1697261‑M1/68‑101 (MQ=255) cactgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCattatt > 2:1696166‑M1/68‑101 (MQ=255) ctgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGc < 2:1376646‑M1/36‑1 (MQ=255) ctgcttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGc > 2:251301‑M1/66‑101 (MQ=255) cttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAg < 2:1011598‑M1/39‑1 (MQ=255) ttttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtgctggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGc < 2:1693078‑M1/40‑1 (MQ=255) tttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTGCCGCCGGGACTCTCCTGCCACATTATTTCCCGcc < 1:192745‑M1/41‑1 (MQ=255) ttcgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCg < 1:180383‑M1/42‑1 (MQ=255) cgttggtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGt > 1:869429‑M1/58‑101 (MQ=255) gtatggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAAt > 2:233111‑M1/53‑101 (MQ=255) gtatggcatgtcatttaaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAAt > 1:1559121‑M1/53‑101 (MQ=255) gtatggcatgtcattggagcagccaccatctgcagatgatggtactggcaggCCCGTTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAAt > 2:12046‑M1/53‑101 (MQ=255) atggcatgtcttttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGt < 1:494697‑M1/51‑1 (MQ=255) ggcatgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCt > 1:1046569‑M1/49‑101 (MQ=255) atgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCTTTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTaca < 2:1616799‑M1/56‑1 (MQ=255) atgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTTATGTTTaca < 2:289586‑M1/56‑1 (MQ=255) atgtcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTaca < 2:965113‑M1/56‑1 (MQ=255) tttcatttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTacac < 1:325897‑M1/57‑1 (MQ=255) catttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCg > 2:939998‑M1/42‑101 (MQ=255) catttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCg < 1:1076848‑M1/60‑1 (MQ=255) atttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGt > 2:1359760‑M1/41‑101 (MQ=255) tttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTa < 1:377718‑M1/62‑1 (MQ=255) ttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCTTTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTAc > 1:1616805‑M1/39‑101 (MQ=255) ttgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTAc > 2:205888‑M1/39‑101 (MQ=255) tgaacagcgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTACt < 2:1219976‑M1/64‑1 (MQ=255) cgaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTACTGGTACAg < 2:757680‑M1/71‑1 (MQ=255) gaacatctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTACTGGTACAGc > 1:1682486‑M1/30‑101 (MQ=255) atctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTACTGGTACAGCGTCa < 1:65798‑M1/76‑1 (MQ=255) tctgcagatgatggtactggcaggCGCATTACCGGCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTACTGGTACAGCGTCAt > 2:443013‑M1/25‑101 (MQ=255) tctgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTACTGGTACAGCGTCAt > 1:672428‑M1/25‑101 (MQ=255) tgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTACTGGTACAGCGTCATTg > 2:494692‑M1/23‑101 (MQ=255) tgcagatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTACTGGTACAGCGTCATTg > 1:1334765‑M1/23‑101 (MQ=255) gcagatgatggtactgggaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTACTGGTACAGCGTCATTgg > 2:1546825‑M1/22‑101 (MQ=255) gatgatggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTACTGGTACAGCGTCATTGGCtg < 1:498572‑M1/83‑1 (MQ=255) ggtactggcaggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTACTGGTACAGCGTCATTGGCTGTGAGCg < 1:222653‑M1/89‑1 (MQ=255) aggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTACTGGTACAGCGTCATTGGCTGTGAGCGTACTGGGCt < 1:175651‑M1/98‑1 (MQ=255) ggCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTACTGGTACAGCGTCATTGGCTGTGAGCGTACTGGGCtt < 1:413526‑M1/99‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTACTGGTACAGCGTCATTGGCTGTGAGCGTACTGGGCTT > 108/1‑99 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |