| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 101 | = 16326 | 0 (0.000) | 64 (1.140) | 46/168 | 0.0 | 76.6% | intergenic (–/–) | –/– | –/– |
| ? | 178 | = 5270 | 39 (0.700) | intergenic (–/–) | –/– | –/– | |||||
TAATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 101/16229‑16326 | tAATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCTCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtag < 2:1642544‑M1/101‑4 (MQ=255)tAATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtag < 2:200070‑M1/101‑4 (MQ=255) aTTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtg < 2:1362846‑M1/101‑6 (MQ=255) aTTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtg > 1:1234580‑M1/1‑96 (MQ=255) aTTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtg > 1:712568‑M1/1‑96 (MQ=255) aTTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtg > 2:596589‑M1/1‑96 (MQ=255) aTTTCGGCCGCAGTTAGCTCATTAAGTAGGTGAGGGCTCTTTTCTACCCGAAAGGTTTGATCCAGCCCGGACTTGAAAACTGATCTTACCCAGCaatagtg < 2:234909/101‑6 (MQ=255) ttCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtgga < 1:1467311‑M1/101‑8 (MQ=255) gTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacac < 2:347311‑M1/101‑11 (MQ=255) tCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCGTTTCTATCTGAAAGGTTTGATCCAGCCCGGACTGGGAAACTGATCTTACGCAGCAAtagtggagacg > 2:482137‑M1/1‑90 (MQ=255) cAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggc < 1:202388‑M1/101‑16 (MQ=255) gTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggcta > 1:291604‑M1/1‑84 (MQ=255) tAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaag < 1:590579‑M1/101‑20 (MQ=255) cgcATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtga < 2:1645661‑M1/101‑23 (MQ=255) cgcATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtga < 2:956949‑M1/101‑23 (MQ=255) gcATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgag < 2:1234575‑M1/101‑24 (MQ=255) gcATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgag < 2:808509‑M1/101‑24 (MQ=255) gcATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgag < 2:1030035‑M1/101‑24 (MQ=255) aGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaact < 1:1649552‑M1/101‑30 (MQ=255) gTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactc > 2:1256588‑M1/1‑71 (MQ=255) gTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactc > 2:1283850‑M1/1‑71 (MQ=255) tGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactct < 2:1025242‑M1/101‑32 (MQ=255) tGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactct < 2:295808‑M1/101‑32 (MQ=255) tGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactct < 1:920772‑M1/101‑32 (MQ=255) gggTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctc < 2:776650‑M1/101‑33 (MQ=255) gTGAGGGCGCTTTTCTGCCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcag < 1:943323‑M1/101‑35 (MQ=255) gTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcag < 1:841786‑M1/101‑35 (MQ=255) tGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagt > 1:116638‑M1/1‑66 (MQ=255) tGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagt > 1:585852‑M1/1‑66 (MQ=255) tGAGGGCGCTTGTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACGGATCTTACCCAGTAAtagtggacacgcggctaagtgagtaaactctcagt < 2:1006109‑M1/101‑36 (MQ=255) ggCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcaga > 2:1089357‑M1/1‑62 (MQ=255) gcTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggt > 2:984048‑M1/1‑59 (MQ=255) tttCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgac > 2:230434‑M1/1‑56 (MQ=255) ttCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgact < 2:1157291‑M1/101‑47 (MQ=255) ttCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgact < 2:1442334‑M1/101‑47 (MQ=255) ttCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgact > 2:1640965‑M1/1‑55 (MQ=255) tACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcac > 2:1486207‑M1/1‑52 (MQ=255) ccTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacat > 2:1146579‑M1/1‑50 (MQ=255) ccTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacat < 1:599321‑M1/101‑52 (MQ=255) cTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatg > 1:1444053‑M1/1‑49 (MQ=255) cTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatg > 1:1571986‑M1/1‑49 (MQ=255) gAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgac > 2:1398322‑M1/1‑47 (MQ=255) gAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgac < 2:116638‑M1/101‑55 (MQ=255) gAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgac > 2:98264‑M1/1‑47 (MQ=255) aaaGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgaca > 1:1462383‑M1/1‑46 (MQ=255) aGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaa < 1:69140‑M1/101‑58 (MQ=255) gTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaa > 2:1230343‑M1/1‑42 (MQ=255) tGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacag < 2:291604‑M1/101‑63 (MQ=255) tGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacag < 1:1256593‑M1/101‑63 (MQ=255) aTCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagta < 2:724297‑M1/101‑65 (MQ=255) tcaagccCGGCCTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtat < 1:462923‑M1/98‑66 (MQ=255) tCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtat < 2:427346‑M1/101‑66 (MQ=255) tCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtat < 1:151507‑M1/101‑66 (MQ=255) cAGCCCGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatca < 1:1337426‑M1/101‑68 (MQ=255) cAGCCCGGACTGGAAAACTGATATTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatca > 1:1029446‑M1/1‑34 (MQ=255) cccGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaacc > 2:1651574‑M1/1‑31 (MQ=255) cGGACTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccag < 2:1234677‑M1/101‑73 (MQ=255) aCTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaa < 1:907355‑M1/101‑76 (MQ=255) cTGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaa > 2:410360‑M1/1‑25 (MQ=255) tGGAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaa > 1:760600‑M1/1‑24 (MQ=255) ggAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaa > 1:1311966‑M1/1‑23 (MQ=255) gAAAACTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaa < 2:774377‑M1/101‑80 (MQ=255) aaaCTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaacc < 2:1579250‑M1/101‑82 (MQ=255) aCTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaacccc < 1:1219255‑M1/101‑84 (MQ=255) aCTGATCTTACCCAGCAAtagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaacccc < 1:1640971‑M1/101‑84 (MQ=255) aatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcc < 1:677316‑M1/101‑100 (MQ=255) | TAATTTCGTCCGCAGTTAGCGCATTAAGTGGGTGAGGGCGCTTTTCTACCTGAAAGGTTTGATCCAGCCCGGACTGGAAAACTGATCTTACCCAGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 101/16229‑16326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |