Predicted mutation
evidence seq id position mutation annotation gene description
JC 9 41,027 (GCAGGT)5→6 intergenic (–/–)  /  –/–

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 9 = 409940 (0.000)42 (0.670)
+GGTGCA
31/122 0.4 100% intergenic (–/–) –/– –/–
?9 40995 = 0 (0.000)intergenic (–/–) –/– –/–

CGGGCCAACCACGATCCCCGCAATCAGCAAAACAAAGAGCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  9/40896‑40994
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCAGGTTACGCACGCGAGTCTGCATCAGTTTT  >  9/40995‑41093
                                                                                                   ||||||                                                                                                   
CGGGCCAACCACGATCCCCGCAATCAGCAAAACAAAGAGCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGG                                                                                                         <  1:1108578/101‑1
  GGCCAACCACGATCCCCGCAATCAGCAAAACAAAGAGCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTG                                                                                                       <  1:422436/101‑1
          ACGATCCCCGCAATCAGCAAAACAAAGAGCAATAACTCTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCA                                                                                               <  2:383814/101‑1
          ACGATCCCCGCAATCAGCAAAACAAAGAGCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCA                                                                                               <  1:68487/101‑1
            GATCCCCGCAATCAGCAAAACAAAGAGCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGG                                                                                             <  2:865078/101‑1
             ATCCCCGCAATCAGCAAAACAAAGAGCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGT                                                                                            <  1:1218443/101‑1
                 CCGCAATCAGCAAAACAAAGAGCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAG                                                                                        >  2:794314/1‑101
                  CGCAATCAGCAAAACAAAGAGCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGG                                                                                       <  2:959374/101‑1
                     AATCAGCAAAACAAAGAGCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGC                                                                                    <  2:403575/101‑1
                     AATCAGCAAAACAAAGAGCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGC                                                                                    >  2:691819/1‑101
                        CAGCAAAACAAAGAGCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGG                                                                                 <  1:1484731/101‑1
                            AAAACAAAGAGCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCA                                                                             >  2:1264697/1‑101
                              AACAAAGAGCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGG                                                                           <  2:600413/101‑1
                              AACAAAGAGCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGG                                                                           >  1:734507/1‑101
                               ACAAAGAGCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGCGCAGGTGCAGGTGCAGGTGCAGGTGCAGcg                                                                          >  1:634820/1‑99
                                CAAAGAGCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTG                                                                         >  1:666038/1‑101
                                CAAAGAGCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTG                                                                         >  1:1480971/1‑101
                                  AAGAGCAATAACACTTTTAGCATTGTTATTTTCTTTGCGCCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCA                                                                       <  2:1135993/101‑1
                                  AAGAGCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCA                                                                       <  2:1318690/101‑1
                                     AGCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGT                                                                    >  1:668553/1‑101
                                      GCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTT                                                                   >  1:1631063/1‑101
                                         ATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAG                                                                >  1:1555276/1‑101
                                         ATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAG                                                                >  2:917101/1‑101
                                          TAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGC                                                               >  1:420978/1‑101
                                          TAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGC                                                               >  1:1627017/1‑101
                                          TAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGC                                                               <  2:895978/101‑1
                                           AACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGGGAATCAGATTGCGGGGCAGGTGCAGGCGCAGGGGCAGGAGCAGGGGCAAGTTTAGCT                                                              >  1:204150/1‑101
                                           AACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCT                                                              >  1:1524685/1‑101
                                            ACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTT                                                             <  2:338508/101‑1
                                              ACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGGGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCC                                                           >  1:1044477/1‑101
                                                   TAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGC                                                      <  2:373404/101‑1
                                                   TAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGC                                                      >  1:1572280/1‑101
                                                      CATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCC                                                   >  2:732229/1‑101
                                                      CATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCC                                                   >  1:1448737/1‑101
                                                      CATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGGGCAGGTGCAGGTTTAGCTTCCGTTGGCCC                                                   >  2:913788/1‑101
                                                          GTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCT                                               <  1:639645/101‑1
                                                            TATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGC                                             >  2:659190/1‑101
                                                             ATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCC                                            <  2:1182682/101‑1
                                                             ATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCC                                            >  2:1545892/1‑101
                                                              TTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCG                                           <  1:1647841/101‑1
                                                               TCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGG                                          >  1:1242616/1‑101
                                                                CTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGT                                         >  1:1017298/1‑101
                                                                          CGCGGCTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCA                               >  2:336904/1‑101
                                                                               CTGCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCAGGTTA                          <  2:686969/101‑1
                                                                                 GCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCAGGTTACG                        >  2:1244663/1‑101
                                                                                 GCCGGAGTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCAGGTTACG                        >  1:635196/1‑101
                                                                                    GGAGTATCACCTTGCGGTGCAGGTTCAGCTGCAGATGCAGGTGCAGGTGCAGGTTTAGCCTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCAGATTACGCAC                     <  2:1379660/101‑1
                                                                                       GTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCAGGTTACGCACGCG                  >  1:1650946/1‑101
                                                                                       GTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCAGGTTACGCACGCG                  >  2:549173/1‑101
                                                                                       GTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCAGGTTACGCACGCG                  >  1:1643566/1‑101
                                                                                       GTATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCAGGTTACGCACGCG                  >  2:1600594/1‑101
                                                                                         ATCAGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCAGGTTACGCACGCGAG                >  1:1135959/1‑101
                                                                                            AGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCAGGTTACGCACGCGAGTCT             <  1:991422/101‑1
                                                                                            AGCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCAGGTTACGCACGCGAGTCT             <  2:1242611/101‑1
                                                                                             GCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCAGGTTACGCACGGGAGTCTG            <  2:204150/101‑1
                                                                                             GCTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCAGGTTACGCACGCGAGTCTG            <  2:1297967/101‑1
                                                                                              CTTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCAGGTTACGCACGCGAGTCTGC           <  1:451133/101‑1
                                                                                               TTGCGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCAGGTTACGCACGCGAGTCTGCA          <  2:1448731/101‑1
                                                                                                  CGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCAGGTTACGCACGCGAGTCTGCATCA       >  1:1234612/1‑101
                                                                                                    GTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCAGGTTACGCACGCGAGTCTGCATCAGT     <  2:533183/101‑1
                                                                                                       CAGGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCAGGTTACGCACGCGAGTCTGCATCAGTTTT  <  1:1444043/101‑1
                                                                                                   ||||||                                                                                                   
CGGGCCAACCACGATCCCCGCAATCAGCAAAACAAAGAGCAATAACACTTTTAGCATGGTTATTCTCCTTGCGGCGCGGCTGCCGGAGTATCAGCTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  9/40896‑40994
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGCAGGTGCAGGTGCAGGTGCAGGTGCAGGTTTAGCTTCCGTTGCCCCCGCTGCCGGTTGTGCCAGCAGGTTACGCACGCGAGTCTGCATCAGTTTT  >  9/40995‑41093

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.