New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	74	= 22019	0 (0.000)	25 (0.400) +GCGCGT	23/188	1.9	34.5%	intergenic (–/–)	–/–	–/–
	?	91	8342 =	101 (1.520)					intergenic (–/–)	–/–	–/–

TCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  74/21921‑22019 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTATCAGGCCTACGC‑AATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCCGGATAAGGCGTTCACTCCGCATCCGGCAC  >  91/8342‑8426                                                                                                    ||||||                                                                                       TCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGC                                                                                            >  1:876149/1‑101     CATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGT                                                                                        >  1:1140626/1‑101      ATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTC                                                                                       >  1:1001994/1‑101       TGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCT                                                                                      <  2:81868/101‑1        GATCATCACGGCGGTCATGGTCCAGGCAAACATCAGCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTT                                                                                     <  1:1534437/101‑1        GATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTT                                                                                     <  1:1529277/101‑1            ATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCA                                                                                 <  2:1694988/101‑1             TCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAG                                                                                >  1:394669/1‑101             TCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAG                                                                                <  1:167360/101‑1              CACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGG                                                                               <  2:327411/101‑1               ACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGC                                                                              >  1:631376/1‑101                 GGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCT                                                                            >  1:955568/1‑101                   CGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGTCCTAC                                                                          <  2:975510/101‑1                    GGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACG                                                                         >  1:111960/1‑101                                                              GGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGT‑GAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCCG                              >  1:872058/1‑101                                                                GTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGT‑GAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCCGGA                            >  2:1470794/1‑101                                                                     AATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGT‑GAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCCGGATAAGG                       <  1:1367504/101‑1                                                                      ATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGT‑GAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCCGGATAAGGC                      >  1:781170/1‑101                                                                          GGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGT‑GAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCCGGATAAGGCGTTC                  <  2:342074/101‑1                                                                          GGCATTCAGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGT‑GAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCCGGATAAGGCGTTC                  >  2:1252039/1‑101                                                                            CATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGT‑GAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCCGGATAAGGCGTTCAC                <  1:627799/101‑1                                                                            CATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGT‑GAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCCGGATAAGGCGTTCAC                <  2:111960/101‑1                                                                             ATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGT‑GAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCCGGATAAGGCGTTCACg               >  1:1592075/1‑100                                                                               TCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGTCCTACGT‑GAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCCGGATAAGGCGTTCACGCC             <  1:1610781/101‑1                                                                                      CTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAAT‑TCTGCAATATATTGAATCTGCATGCTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCG      >  2:425858/1‑101                                                                                         ATGCGACGCTGGCGCGTCTTATCAGGCCTACGTGAAT‑TCTGCAATATATTGAATCTGCATGCTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA   >  1:1047888/1‑101                                                                                          TGCGACGCTGGCGCGTCTTATCAGGCCTACGT‑GAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAt  >  1:990425/1‑100                                                                                                    ||||||                                                                                       TCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  74/21921‑22019 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTATCAGGCCTACGC‑AATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCCGGATAAGGCGTTCACTCCGCATCCGGCAC  >  91/8342‑8426

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.