New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 62 = 2157230 (0.450)36 (0.540) 31/200 1.9 35.5% intergenic (–/–) –/– –/–
?62 23924 = 101 (1.520)intergenic (–/–) –/– –/–

CTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  62/21476‑21572
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCG  >  62/23924‑24019
                                                                                                                                                                                                 
CTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCG                                                                                              >  2:1553970/1‑101
 TGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGG                                                                                             >  2:609381/1‑101
 TGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGG                                                                                             <  1:426016/101‑1
         ATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACA                                                                                     >  2:1561566/1‑101
          TCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACAC                                                                                    <  1:432701/101‑1
                      CCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAA                                                                        >  2:351355/1‑101
                       CTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAAT                                                                       <  1:1129461/101‑1
                        TACAGCAGTTACCGGACAAAACCGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATC                                                                      <  2:474277/101‑1
                         ACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCT                                                                     <  1:286333/101‑1
                           AGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGG                                                                   >  1:1321980/1‑101
                            GCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGA                                                                  <  1:217891/101‑1
                               GTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATAT                                                               <  2:455157/101‑1
                                 TACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCC                                                             <  1:715713/101‑1
                                   CCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGC                                                           >  2:1669909/1‑101
                                      GACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATC                                                        >  2:1617326/1‑101
                                        CAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCC                                                      <  1:609386/101‑1
                                        CAAAAACCCCCGCGCCGGTGTGTAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCttgtttt                                                      <  2:999942/101‑8
                                            AACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTAT                                                  <  2:962746/101‑1
                                                 CCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCAC                                             >  1:656075/1‑101
                                                 CCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCAC                                             >  1:525202/1‑101
                                                  CGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACA                                            <  1:1553976/101‑1
                                                       CGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCC                                       <  1:1602049/101‑1
                                                        GGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCG                                      >  1:1264934/1‑101
                                                           GGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCA                                   >  2:1480208/1‑101
                                                                 CCTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAAC                             >  1:1521337/1‑101
                                                                  CTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACC                            >  1:1231960/1‑101
                                                                  CTCGGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACC                            >  1:303854/1‑101
                                                                     GGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCCCACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCC                         <  2:411697/101‑1
                                                                     GGCCCCGGCTGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCC                         >  1:642232/1‑101
                                                                              TGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACC                <  1:379449/101‑1
                                                                              TGGAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACC                <  1:1617332/101‑1
                                                                                GAAAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCG              >  2:461960/1‑101
                                                                                  gAATGCCTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGAAACAGACCCGGCAGGAAACCGCCTGCCCCACCCCGA            >  2:1711935/2‑101
                                                                                       CCTGCGGATAACCGGCGTGCACACCACCACAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGACCGACCCAGAGCccc       >  2:686037/1‑98
                                                                                        CTGCGGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCA      <  1:445420/101‑1
                                                                                            GGATAACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCAGGAGCTGCACCCG  >  2:259241/1‑101
                                                                                                                                                                                                 
CTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  62/21476‑21572
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCG  >  62/23924‑24019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.