| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 57 | 1 = | 0 (0.000) | 23 (0.390) +GGAGCACGAAT |
19/178 | 2.3 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 73 | = 22246 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
CGAAATGCAGATCCTGACGCTGGGTCGTGCGGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 57/100‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTAAGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAAA < 73/22246‑22206 ||||||||||| CGAAATGCAGATCCTGACGCTGGGTCGTGCGGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGG > 2:1090585/1‑101 GAAATGCAGATCCTGACGCTGGGTCGTGCGGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGG > 2:899513/1‑101 AATGCAGATCCTGACGCTGGGTCGTGCGGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAG > 1:952585/1‑101 ATGCAGATCCTGACACTAGGTCGTGCGGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGC < 2:149455/101‑1 TGCAGATCCTGACGCTGGGTCGTGCGGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCA < 1:1090590/101‑1 GCAGATCCTGACGCTGGGTCGTGCGGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCAC < 2:1696220/101‑1 CAGATCCTGACGCTGGGTCGTGCGGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACG < 2:781160/101‑1 CAGATCCTGACGCTGGGTCGTGCGGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACG > 1:18334/1‑101 AGATCCTGACGCTGGGTCGTGCGGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGA > 1:912838/1‑101 ATCCTGACGCTGGGTCGTGCGGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAAT < 2:952580/101‑1 CCTGACGCTGGGTCGTGCGGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGT < 2:1437320/101‑1 CTGACTCTGGGTCGTGCGGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTA < 1:1018370/101‑1 TGACGCTGGGTCGTGCGGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTAg < 2:300635/101‑2 CTGGGTCGTGCGGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTAGGCCGG < 2:709119/101‑1 CGTGCGGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTAGGCCGGATAAGG < 2:1411579/101‑1 GTGCGGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTAGGCCGGATAAGGC > 1:1616453/1‑101 TGCGGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTAGGCCGGATAAGGCG > 2:1660470/1‑101 GCGGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTAGGCCGGATAAGGCGT < 1:708338/101‑1 GGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTAGGCCGGATAAGGCGTTT < 2:200703/101‑1 GTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTAGGCCGGATAAGGCGTTTA < 2:1553968/101‑1 TGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTAGGCCGGATAAGGCGTTTACGCC > 1:54462/1‑101 TGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTAGGCCGGATAAGGCGTTTACGCC < 2:835178/101‑1 TGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGAACGAATGTAGGCCGGATAAGGCGTTTACGCC < 2:444388/101‑1 AGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTAGGCCGGATAAGGCGTTTACGCCGCA < 2:672936/101‑1 AGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTAGGCCGGATAAGGCGCTTACGCCGCA > 1:1706172/1‑101 AATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCC < 1:272695/101‑1 ATACAGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCG > 2:548517/1‑101 CGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAg > 2:377375/1‑100 GCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAgt > 2:630403/1‑99 TAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTCA < 1:463826/101‑1 AAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTCAt < 2:912833/101‑2 AAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTCAt < 2:350565/101‑2 AGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGAGCACGAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTCAtg > 1:1292228/1‑99 ||||||||||| CGAAATGCAGATCCTGACGCTGGGTCGTGCGGTGCTGAAGCAATACCGCTAAGTCCGTGCGCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 57/100‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTAAGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAAA < 73/22246‑22206 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |