| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 223 | = 698 | 0 (0.000) | 48 (0.750) +AGTT |
36/192 | 1.1 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 94 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 223/618‑698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAAGGAATAGAATTACCGC > 94/1‑97 |||| AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGAT > 2:738043/1‑101AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGAT > 1:920244/1‑101 TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGA < 1:1356406/101‑1 TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGA > 1:1121901/1‑101 AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCACTAAGTTGGCAGCATCACCCGAATTTTGAGAGCC > 2:654398/1‑101 AGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGC > 2:43733/1‑101 CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATG < 1:91360/101‑1 CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATG < 2:518298/101‑1 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGT > 2:302374/1‑101 gaaAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTT < 2:17834/98‑1 GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTT < 1:1270715/101‑1 TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCA < 2:1224727/101‑1 ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAG > 1:1340978/1‑101 GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTC < 1:1090978/101‑1 GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACG < 1:744431/101‑1 GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACG < 2:1288581/101‑1 CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGT < 2:92716/101‑1 CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGT < 2:1121896/101‑1 CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGT > 1:1026978/1‑101 CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCCCCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTT < 1:1220104/101‑1 TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTC < 2:934834/101‑1 GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCA < 1:1130047/101‑1 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAG < 2:323712/101‑1 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGT < 1:1082662/101‑1 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGT < 1:1123177/101‑1 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGT > 2:744683/1‑101 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTC > 1:1124688/1‑101 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTC > 1:258604/1‑101 TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCG < 1:1007703/101‑1 TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCG < 2:1704936/101‑1 AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATA < 1:215211/101‑1 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGC > 2:1424495/1‑101 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCGAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCG > 2:901999/1‑101 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCG < 1:654975/101‑1 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCG > 1:1187303/1‑101 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCG > 2:1300205/1‑101 TCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGC > 2:1522729/1‑101 CATACACTAAATCAGTAAGTTGGCAGTATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCA < 2:258604/101‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAA > 1:197857/1‑101 ATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAA > 1:919513/1‑101 TACACTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAAG > 2:314821/1‑101 CTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAAGGAAT < 2:1067016/101‑1 CTAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAAGGAAT < 2:70206/101‑1 TAAATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCCCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGTAAGGAATA < 2:839859/101‑1 AATCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAAGGAATAGA < 1:744688/101‑1 TCAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAAGGAATAGAAT < 1:1538161/101‑1 CAGTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAAGGAATAGAATT < 1:1593881/101‑1 GTAAGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAAGGAATAGAATTAC > 1:977713/1‑101 AGTTGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAAGGAATAGAATTACCGC > 2:379092/1‑101 |||| AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 223/618‑698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAAGGAATAGAATTACCGC > 94/1‑97 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |