New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 223 = 6980 (0.000)57 (1.020)
+AGTTGGCAGCATCACC
47/168 0.2 100% intergenic (–/–) –/– –/–
?55 1 = 0 (0.000)intergenic (–/–) –/– –/–

TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  223/616‑698
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGTCTCTGAAGA  >  55/1‑99
                                                                                   ||||||||||||||||                                                                                                   
TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCT                                                                                                   <  1:1466396/101‑1
TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCT                                                                                                   <  2:682607/101‑1
   GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGAC                                                                                                >  2:875079/1‑101
   GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATAAGTAAGTTGGCAGCATCACCCTGAC                                                                                                >  2:804043/1‑101
       CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACA                                                                                            <  1:838850/101‑1
         GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAAT                                                                                          <  1:310506/101‑1
         GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAAT                                                                                          <  1:389396/101‑1
            CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCT                                                                                       <  2:1508364/101‑1
             AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTG                                                                                      >  2:404616/1‑101
             AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTG                                                                                      >  2:3477/1‑101
              GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGT                                                                                     >  2:614817/1‑101
               GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTT                                                                                    <  2:1672306/101‑1
                 GGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGA                                                                                  >  1:1611531/1‑101
                  GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAG                                                                                 <  2:530889/101‑1
                     CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTT                                                                              >  2:668473/1‑101
                     CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTT                                                                              >  2:949702/1‑101
                         TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACC                                                                          >  2:683899/1‑101
                         TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACC                                                                          >  2:1266897/1‑101
                           ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCAT                                                                        <  2:534213/101‑1
                           ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCAT                                                                        >  2:1636595/1‑101
                            TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATT                                                                       <  1:324782/101‑1
                              GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAA                                                                     >  1:1091976/1‑101
                               AAACAGAAGCCACTGGAGCCCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAAC                                                                    <  2:147912/101‑1
                                  CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCAT                                                                 <  2:797545/101‑1
                                  CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCAT                                                                 <  2:192765/101‑1
                                   AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATA                                                                <  1:1075203/101‑1
                                    GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAG                                                               <  2:743946/101‑1
                                     AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGC                                                              >  1:1294121/1‑101
                                      AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCC                                                             >  2:750118/1‑101
                                       GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCA                                                            <  1:1535497/101‑1
                                         CACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATA                                                          <  1:558750/101‑1
                                          ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATAC                                                         <  1:1134833/101‑1
                                          ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATAC                                                         >  1:537641/1‑101
                                            TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTG                                                       <  1:1209922/101‑1
                                               AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCAT                                                    <  2:1611525/101‑1
                                                GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATG                                                   <  2:853519/101‑1
                                                  ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTT                                                 <  1:404621/101‑1
                                                   CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTG                                                >  1:1098733/1‑101
                                                   CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTG                                                >  1:374036/1‑101
                                                    CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGG                                               <  2:564992/101‑1
                                                    CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGG                                               >  1:895314/1‑101
                                                    CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGG                                               <  2:1674416/101‑1
                                                      CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGG                                             >  2:1448828/1‑101
                                                       AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGG                                            >  1:1537453/1‑101
                                                        AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGA                                           >  1:548024/1‑101
                                                          AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACT                                         <  1:479710/101‑1
                                                            CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGA                                       >  1:1121835/1‑101
                                                            CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGA                                       >  1:635527/1‑101
                                                                ATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCT                                   >  2:1278232/1‑101
                                                                  CATACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGC                                 >  1:1090245/1‑101
                                                                     ACACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCAT                              >  1:900463/1‑101
                                                                      CACTAAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATT                             <  1:591754/101‑1
                                                                          AAATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATC                         <  1:1436812/101‑1
                                                                            ATCAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGC                       >  2:1456749/1‑101
                                                                              CAGTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTA                     >  2:422632/1‑101
                                                                                GTAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAAT                   <  2:374036/101‑1
                                                                                 TAAGTTGGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATG                  >  1:559684/1‑101
                                                                                       cGCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAG            >  2:1126248/2‑101
                                                                                        GCAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATCCTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGT           <  2:892051/101‑1
                                                                                         CAGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGTC          >  1:79856/1‑101
                                                                                          AGCATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGTCT         >  1:802870/1‑101
                                                                                            CATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGTCTCT       >  1:256166/1‑101
                                                                                             ATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGTCTCTG      >  2:1101801/1‑101
                                                                                             ATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGTCTCTG      >  2:1441178/1‑101
                                                                                             ATCACCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGTCTCTG      >  1:1456990/1‑101
                                                                                                 CCCTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGTCTCTGAAGA  <  2:461513/101‑1
                                                                                   ||||||||||||||||                                                                                                   
TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  223/616‑698
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTGACCACAATGCTGTTGAGGTTGACCATTAACCATAGCCATACTGCATGTTGGGGGACTGATCCTGCCATTAATCGCTAATGTGGCAGTCTCTGAAGA  >  55/1‑99

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.