New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 223 1 =0 (0.000)46 (0.880)
+GTCATCGGGCATTATCTGAACA
35/156 0.5 100% intergenic (–/–) –/– –/–
?98 = 17037 0 (0.000)intergenic (–/–) –/– –/–

TAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  223/82‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGC  <  98/17037‑16938
                                                                                  ||||||||||||||||||||||                                                                                                    
tacCCTGAATCTGAGGCAGCACCTGGCGCGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGA                                                                                                         <  2:139217/98‑1
    ctaAATCTGAGGCAGCGCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACAT                                                                                                     <  2:1610068/98‑1
             agacaacatCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTA                                                                                            >  2:1045711/10‑101
               acaacatCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATC                                                                                          >  1:251163/8‑101
               acaacatCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATC                                                                                          >  1:613634/8‑101
                  acatCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAgt                                                                                       >  2:745310/5‑99
                    acgTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA                                                                                     >  2:476960/4‑101
                     CCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAT                                                                                    <  1:1695149/101‑1
                        GGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGG                                                                                 >  2:81147/1‑101
                          CACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAG                                                                               >  2:1509628/1‑101
                           ACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGT                                                                              >  2:762347/1‑101
                           ACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGT                                                                              >  1:1011135/1‑101
                                 GGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTAC                                                                        >  2:892499/1‑101
                                 GGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTAC                                                                        <  1:881260/101‑1
                                       GAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTC                                                                  <  2:836313/101‑1
                                       GAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTC                                                                  >  1:1579485/1‑101
                                         AGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTC                                                                <  1:248145/101‑1
                                            CGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCT                                                             <  1:681111/101‑1
                                            CGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCT                                                             >  2:1583370/1‑101
                                            CGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCT                                                             <  1:1264378/101‑1
                                             GCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTC                                                            <  2:1158621/101‑1
                                              CTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCT                                                           >  2:1439348/1‑101
                                              CTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCT                                                           >  1:1362667/1‑101
                                              CTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCT                                                           >  1:1349004/1‑101
                                                GTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCT                                                         >  2:1446263/1‑101
                                                   GTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCT                                                      >  1:947190/1‑101
                                                         AAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTC                                                >  2:388420/1‑101
                                                          AAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCC                                               >  1:1383910/1‑101
                                                              CGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGA                                           >  1:1258012/1‑101
                                                                GTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCGTCTCTGCTGTTTTCCAGGAAA                                         >  2:1522925/1‑101
                                                                GTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAA                                         <  2:1011130/101‑1
                                                                 TGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAG                                        <  1:1226507/101‑1
                                                                  gctGCTGCAGGACCAGGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTGATCGCCCATTCTCCCTCACTGCTGTTTTCCAGGAAAGG                                       <  2:1590742/98‑1
                                                                   GAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGG                                      <  1:1066369/101‑1
                                                                    AGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGA                                     <  1:1111357/101‑1
                                                                      CTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGT                                   >  1:1554919/1‑101
                                                                      CTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGT                                   <  2:639734/101‑1
                                                                        GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGA                                 <  2:1204445/101‑1
                                                                         CATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAA                                <  1:1183729/101‑1
                                                                          ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCCCTCTTCTGTTTTCCAGGAAAGGGAGTGAAG                               <  2:123223/101‑1
                                                                            GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAG                             >  2:870517/1‑101
                                                                             ACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGA                            >  2:1485327/1‑101
                                                                               AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAA                          <  1:81147/101‑1
                                                                               AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAA                          <  1:731738/101‑1
                                                                                AAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAAC                         <  1:277878/101‑1
                                                                                 AGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACA                        <  2:462523/101‑1
                                                                                 AGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACA                        <  2:388418/101‑1
                                                                                  GTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAA                       >  2:583615/1‑101
                                                                                    CATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAA                     >  1:1404197/1‑101
                                                                                      TCGGGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATT                   <  2:1337224/101‑1
                                                                                         GGCATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAAT                <  1:459570/101‑1
                                                                                            ATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCG             <  2:35955/101‑1
                                                                                            ATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCG             >  2:790365/1‑101
                                                                                            ATTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCG             <  1:844976/101‑1
                                                                                             TTATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGT            <  1:993129/101‑1
                                                                                              TATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTC           >  1:545178/1‑101
                                                                                              TATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTC           <  2:474734/101‑1
                                                                                              TATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTC           <  1:1446269/101‑1
                                                                                               ATCTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCG          <  1:487742/101‑1
                                                                                                 CTGAACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAG        >  1:847077/1‑101
                                                                                                    AACATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGAT     <  1:1367692/101‑1
                                                                                                       ATAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGC  >  1:1160241/1‑101
                                                                                  ||||||||||||||||||||||                                                                                                    
TAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  223/82‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAAACACTATCAATAATTGGAGTCATTACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGC  <  98/17037‑16938

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.