| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 222 | 1 = | 0 (0.000) | 76 (1.140) | 58/200 | 0.1 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 97 | 2 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 222/98‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCTATACCTGATAA > 97/2‑101 GTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTT > 1:21616/1‑101 TGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTG < 2:157901/101‑1 ATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGAT > 2:686991/1‑101 ATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGAT < 1:1402865/101‑1 ATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGAT > 2:370781/1‑101 TTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATA < 2:691679/101‑1 TTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATA > 1:540187/1‑101 CGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAA > 2:1402339/1‑101 ACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATA > 1:1487266/1‑101 AAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCC < 2:239215/101‑1 AAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCC > 2:916019/1‑101 AGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCT > 2:49278/1‑101 GGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTG < 2:1510289/101‑1 GCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GCTGATAGAAATATCGCCTGG < 2:1264364/101‑1 TTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTT < 1:1187480/101‑1 CAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTG > 1:769184/1‑101 CAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTG > 1:427895/1‑101 CAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTG > 1:802940/1‑101 CAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTG > 2:1323014/1‑101 CAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTG > 1:1614000/1‑101 AAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCC > 1:70283/1‑101 GGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCAT < 2:1296015/101‑1 GGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCAT > 2:1014242/1‑101 GTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCT < 1:1024198/101‑1 GTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCT < 2:326464/101‑1 GTATTTTGGCTTTGACATATTAGGGGCTATCCCATTTCAGCGTCCAACAAAATAGGTGCAGAACA‑GTTGACAGAAATAGCGCCGGGGCATTTTGTACATCT > 2:1269747/1‑101 TATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTG > 1:1254681/1‑101 ATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGG < 1:171002/101‑1 TTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGC < 1:1402345/101‑1 TGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGA > 1:544213/1‑101 TGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGA > 2:1052986/1‑101 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAAT < 1:968341/101‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAAT < 1:649360/101‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAAT < 2:265811/101‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAAT < 1:965172/101‑1 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGC > 1:102590/1‑101 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGC > 2:1622524/1‑101 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGC > 2:775459/1‑101 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCT > 1:1026502/1‑101 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTT > 2:1035627/1‑101 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTA < 1:370781/101‑1 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTA < 1:1269915/101‑1 GGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAAC > 1:811464/1‑101 GGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACG < 2:975607/101‑1 GGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACG > 2:856663/1‑101 GGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACG < 1:360589/101‑1 GGCTATTCCATTTCATCGTCGAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCC < 1:1374933/101‑1 GGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCC > 2:1410103/1‑101 CTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAG > 2:1247453/1‑101 CTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAG < 1:1164423/101‑1 CTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAG > 1:160024/1‑101 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGA > 2:1118977/1‑101 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGAC > 1:1106619/1‑101 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAG > 2:1155600/1‑101 CCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGC < 1:1097893/101‑1 ATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCT < 2:823356/101‑1 ATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCT > 1:1537459/1‑101 ATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCT < 2:66131/101‑1 ATTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCAAGACAGCCT > 2:1644577/1‑101 TTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTC > 1:232337/1‑101 TTTCATCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTC < 1:1438390/101‑1 TCGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCA < 1:1035632/101‑1 CGTCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCAC > 2:115090/1‑101 TCCAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCC < 1:1293162/101‑1 CAACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGA > 2:220974/1‑101 ACAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACG < 2:317719/101‑1 CAAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGC < 1:1622530/101‑1 AAAATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCC > 2:133734/1‑101 AATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCAT < 2:540182/101‑1 ATGGGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATT > 2:1005682/1‑101 GGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCTA > 1:1141745/1‑101 GGTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCTA < 2:1266378/101‑1 GTGCAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCTAT < 1:1076662/101‑1 CAGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCTATACC > 2:4481/1‑101 AGTACA‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCTATACCT < 1:1277006/101‑1 A‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCTATACCTGATAA > 1:1459790/1‑101 GTGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 222/98‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCTATACCTGATAA > 97/2‑101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |