New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 222 1 =0 (0.000)70 (1.050) 53/200 0.2 100% intergenic (–/–) –/– –/–
?48 1 = 0 (0.000)intergenic (–/–) –/– –/–

TGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  222/97‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCTCGCGCGTTGT  >  48/1‑100
                                                                                                                                                                                                     
TGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAAC                                                                                                  <  2:1162092/101‑1
    TCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCT                                                                                              <  1:1671001/101‑1
      ACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGG                                                                                            <  2:1505336/101‑1
        GACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAG                                                                                          >  2:1263009/1‑101
           TTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGT                                                                                       >  2:1306067/1‑101
               AGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCG                                                                                   <  2:1283846/101‑1
               AGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCG                                                                                   <  2:393685/101‑1
                     TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTT                                                                             <  1:428650/101‑1
                     TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTT                                                                             >  1:369969/1‑101
                      TTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTC                                                                            >  1:1540970/1‑101
                       TTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCT                                                                           >  1:465003/1‑101
                       TTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCT                                                                           <  1:167507/101‑1
                       TTCAAAAGGGGATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCT                                                                           >  2:416815/1‑101
                         CAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGC                                                                         >  1:314818/1‑101
                           AAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTC                                                                       >  1:246135/1‑101
                            AAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCA                                                                      <  1:860287/101‑1
                            AAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGGGTCGGGCTTTCTGCTCA                                                                      >  2:1664772/1‑101
                             AGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCAC                                                                     <  1:367480/101‑1
                               GGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGC                                                                   >  1:201948/1‑101
                                 TATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCA                                                                 >  2:545477/1‑101
                                       GGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGT                                                           >  1:625340/1‑101
                                         CTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTT                                                         >  2:364136/1‑101
                                         CTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTT                                                         >  1:1307463/1‑101
                                         CTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTT                                                         <  1:1533617/101‑1
                                         CTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTT                                                         >  1:1678766/1‑101
                                         CTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTT                                                         >  1:688021/1‑101
                                         CTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGAGTGTCGGGCTTTCTGATCACGCCAATAAGTTT                                                         >  2:1587903/1‑101
                                          TTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTC                                                        >  1:941820/1‑101
                                           TTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCC                                                       >  1:438284/1‑101
                                            TGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCG                                                      <  2:677009/101‑1
                                              ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCCCGCCAATAAGTTTCCGGC                                                    >  1:826489/1‑101
                                                ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGC                                                  >  2:216810/1‑101
                                                ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGC                                                  >  1:1266130/1‑101
                                                ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGC                                                  >  2:1611547/1‑101
                                                ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGC                                                  >  2:564884/1‑101
                                                   tccgatctTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGC                                               <  2:854812/93‑1
                                                   TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGC                                               <  1:920410/101‑1
                                                     AGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTT                                             <  2:941815/101‑1
                                                      GGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTT                                            >  1:1067627/1‑101
                                                         GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCG                                         <  1:1611553/101‑1
                                                           TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCagatcgga                                       >  1:854817/1‑93
                                                           TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGC                                       >  1:1276795/1‑101
                                                            ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGTTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCG                                      >  2:1265214/1‑101
                                                             TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGG                                     >  1:725608/1‑101
                                                               CCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTC                                   <  1:1306073/101‑1
                                                                    TCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAG                              <  2:1106021/101‑1
                                                                    TCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAG                              <  2:1280557/101‑1
                                                                      ATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCA                            <  2:466245/101‑1
                                                                      ATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCA                            >  2:1354737/1‑101
                                                                      ATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCA                            >  1:443877/1‑101
                                                                      ATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCA                            >  1:472345/1‑101
                                                                         GTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCG                         >  2:508385/1‑101
                                                                          TCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGT                        >  2:753751/1‑101
                                                                            CAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGT                      <  1:692362/101‑1
                                                                               CAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGC                   >  1:1194407/1‑101
                                                                                 AAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAA                 <  1:935685/101‑1
                                                                                   ATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATC               >  2:715216/1‑101
                                                                                    TGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCG              <  1:914156/101‑1
                                                                                    TGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCG              >  2:1448766/1‑101
                                                                                    TGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCG              <  2:1057456/101‑1
                                                                                     GGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGC             >  1:554443/1‑101
                                                                                      GGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCT            <  2:496726/101‑1
                                                                                      GGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCT            <  2:201948/101‑1
                                                                                         GCAGTACAAAACTGCTGGAGCGTGTCGGGTTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCTCGC         <  1:1265219/101‑1
                                                                                          CAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCTCGCG        >  2:1051914/1‑101
                                                                                            GTACAAAACTGCTGGATCGTGTCGGGCTTTCTTCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCTCGCGCG      >  2:1319044/1‑101
                                                                                            GTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGCTCAGCAGCAGCGTGCGTCAATCGCTCGCGCG      >  2:1623880/1‑101
                                                                                              ACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCTCGCGCGTT    >  2:1157039/1‑101
                                                                                               CAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCTCGCGCGTTG   <  1:564889/101‑1
                                                                                                AAAAATGCTGTGGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCCGGGGTCAGCAGCAGCGTGTGGCAATCGCTCGCGCGTTGT  >  2:464419/1‑101
                                                                                                                                                                                                     
TGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  222/97‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCTCGCGCGTTGT  >  48/1‑100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.