New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 222 | 1 = | 0 (0.000) | 70 (1.050) | 53/200 | 0.2 | 100% | intergenic (–/–) | –/– | –/– |
? | 48 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
TGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 222/97‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCTCGCGCGTTGT > 48/1‑100 TGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAAC < 2:1162092/101‑1 TCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCT < 1:1671001/101‑1 ACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGG < 2:1505336/101‑1 GACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAG > 2:1263009/1‑101 TTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGT > 2:1306067/1‑101 AGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCG < 2:1283846/101‑1 AGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCG < 2:393685/101‑1 TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTT < 1:428650/101‑1 TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTT > 1:369969/1‑101 TTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTC > 1:1540970/1‑101 TTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCT > 1:465003/1‑101 TTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCT < 1:167507/101‑1 TTCAAAAGGGGATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCT > 2:416815/1‑101 CAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGC > 1:314818/1‑101 AAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTC > 1:246135/1‑101 AAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCA < 1:860287/101‑1 AAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGGGTCGGGCTTTCTGCTCA > 2:1664772/1‑101 AGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCAC < 1:367480/101‑1 GGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGC > 1:201948/1‑101 TATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCA > 2:545477/1‑101 GGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGT > 1:625340/1‑101 CTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTT > 2:364136/1‑101 CTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTT > 1:1307463/1‑101 CTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTT < 1:1533617/101‑1 CTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTT > 1:1678766/1‑101 CTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTT > 1:688021/1‑101 CTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGAGTGTCGGGCTTTCTGATCACGCCAATAAGTTT > 2:1587903/1‑101 TTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTC > 1:941820/1‑101 TTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCC > 1:438284/1‑101 TGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCG < 2:677009/101‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCCCGCCAATAAGTTTCCGGC > 1:826489/1‑101 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGC > 2:216810/1‑101 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGC > 1:1266130/1‑101 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGC > 2:1611547/1‑101 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGC > 2:564884/1‑101 tccgatctTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGC < 2:854812/93‑1 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGC < 1:920410/101‑1 AGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTT < 2:941815/101‑1 GGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTT > 1:1067627/1‑101 GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCG < 1:1611553/101‑1 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCagatcgga > 1:854817/1‑93 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGC > 1:1276795/1‑101 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGTTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCG > 2:1265214/1‑101 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGG > 1:725608/1‑101 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTC < 1:1306073/101‑1 TCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAG < 2:1106021/101‑1 TCATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAG < 2:1280557/101‑1 ATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCA < 2:466245/101‑1 ATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCA > 2:1354737/1‑101 ATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCA > 1:443877/1‑101 ATCGTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCA > 1:472345/1‑101 GTCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCG > 2:508385/1‑101 TCCAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGT > 2:753751/1‑101 CAACAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGT < 1:692362/101‑1 CAAAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGC > 1:1194407/1‑101 AAATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAA < 1:935685/101‑1 ATGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATC > 2:715216/1‑101 TGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCG < 1:914156/101‑1 TGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCG > 2:1448766/1‑101 TGGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCG < 2:1057456/101‑1 GGGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGC > 1:554443/1‑101 GGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCT < 2:496726/101‑1 GGTGCAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCT < 2:201948/101‑1 GCAGTACAAAACTGCTGGAGCGTGTCGGGTTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCTCGC < 1:1265219/101‑1 CAGTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCTCGCG > 2:1051914/1‑101 GTACAAAACTGCTGGATCGTGTCGGGCTTTCTTCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCTCGCGCG > 2:1319044/1‑101 GTACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGCTCAGCAGCAGCGTGCGTCAATCGCTCGCGCG > 2:1623880/1‑101 ACAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCTCGCGCGTT > 2:1157039/1‑101 CAAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCTCGCGCGTTG < 1:564889/101‑1 AAAAATGCTGTGGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCCGGGGTCAGCAGCAGCGTGTGGCAATCGCTCGCGCGTTGT > 2:464419/1‑101 TGATTCACGACTTCAAGGCGCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 222/97‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCTCGCGCGTTGT > 48/1‑100 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |