New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 210 2891 =NA (NA)45 (1.070)
+ATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCT
30/126 0.2 100% intergenic (–/–) –/– –/–
?58 1 = 0 (0.000)intergenic (–/–) –/– –/–

‑‑‑‑‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  210/2923‑2891
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGC  >  58/1‑100
                                      |||||||||||||||||||||||||||||||||||||                                                                                                    
actgtAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAAC                                                                            <  2:995654/96‑1
 acgtAGGCCTGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACG                                                                           <  1:231368/97‑1
  tgtAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGg                                                                          >  1:759105/4‑100
    tcGGCCGAATACGGCGTTCTCGCCTCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAG                                                                        <  1:1359849/99‑1
    tAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAG                                                                        <  2:942033/100‑1
     AGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGG                                                                       >  1:849417/1‑101
     AGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGG                                                                       <  1:1543094/101‑1
     AGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGG                                                                       <  2:37488/101‑1
       GCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCC                                                                     <  1:1139016/101‑1
        CCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCG                                                                    <  1:1422826/101‑1
        CCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCG                                                                    <  2:1541164/101‑1
          GGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGA                                                                  >  2:1255458/1‑101
          GGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGA                                                                  >  2:480510/1‑101
          GGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGA                                                                  >  1:37488/1‑101
          GGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGA                                                                  >  1:872558/1‑101
           GATACGGCGTTCACGACGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGAT                                                                 <  1:1078019/101‑1
           GATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGAT                                                                 >  2:228284/1‑101
            ATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGATA                                                                >  2:855521/1‑101
              AAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGATAAG                                                              >  2:1139011/1‑101
               AGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGATAAGG                                                             <  2:512133/101‑1
                GGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGC                                                            >  1:20498/1‑101
                  CGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCAT                                                          <  2:1425294/101‑1
                   GTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATT                                                         >  2:944057/1‑101
                   GTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATT                                                         >  1:636060/1‑101
                    TTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTT                                                        <  2:961784/101‑1
                    TTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTT                                                        >  2:1610413/1‑101
                    TTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTT                                                        <  2:391539/101‑1
                     TCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTA                                                       <  1:494220/101‑1
                        CGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGC                                                    <  1:667630/101‑1
                         GCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGATAAGGCGTTCACGCC                                                   >  2:1502140/1‑101
                         GCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCC                                                   <  1:1094064/101‑1
                          CCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCG                                                  >  2:969768/1‑101
                          CCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCG                                                  >  1:224408/1‑101
                           CGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGC                                                 >  1:771757/1‑101
                              ATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGATAAGGCGTTCACGCCGCATC                                              <  1:825841/101‑1
                              ATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATC                                              <  2:178788/101‑1
                               TCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGATAAGGCGTTCACGCCGCATCC                                             <  1:1147743/101‑1
                               TCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGATAAGGCGTTCACGCCGCATCC                                             <  1:1368599/101‑1
                                  GGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGC                                          <  2:1205181/101‑1
                                   GCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA                                         >  1:1112866/1‑101
                                    CAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAA                                        >  1:820118/1‑101
                                     AATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAAT                                       >  1:189620/1‑101
                                     AATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAAT                                       >  2:1533539/1‑101
                                     AATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAAT                                       >  1:1092200/1‑101
                                     AATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAAT                                       >  2:989072/1‑101
                                      ATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATT                                      >  1:718556/1‑101
                                        CGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCT                                    <  2:1112861/101‑1
                                        CGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCT                                    >  2:748632/1‑101
                                         GGTGCTCGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTC                                   <  2:681637/101‑1
                                         GGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTC                                   <  2:1585821/101‑1
                                          GTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCT                                  >  1:879788/1‑101
                                            GCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGC                                <  2:117754/101‑1
                                            GCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGC                                >  2:356189/1‑101
                                                GATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCT                            <  2:153191/101‑1
                                                 ATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTG                           >  1:1624655/1‑101
                                                 ATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTG                           >  2:105609/1‑101
                                                 ATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTG                           >  2:93030/1‑101
                                                   GCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGAT                         <  1:1610419/101‑1
                                                    CCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATG                        >  1:1568898/1‑101
                                                    CCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATG                        <  1:1582653/101‑1
                                                       GATGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGG                     <  2:347123/101‑1
                                                        ATGCGACGCTTGCGCGTCTTATCATCCCTAAACCCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGG                    <  2:874837/101‑1
                                                         TGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGC                   <  1:1016371/101‑1
                                                         TGCGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGC                   <  1:1390618/101‑1
                                                           CGACGCTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGC                 <  1:1550880/101‑1
                                                                CTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAAT            >  2:1053274/1‑101
                                                                CTTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAAT            <  2:820113/101‑1
                                                                 TTGCGCGTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATG           >  1:134204/1‑101
                                                                       GTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGT     >  2:1170860/1‑101
                                                                       GTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGT     >  1:169858/1‑101
                                                                       GTCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGT     >  2:1387675/1‑101
                                                                        TCTTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTG    <  1:228284/101‑1
                                                                          TTATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGC  >  2:1465113/1‑101
                                      |||||||||||||||||||||||||||||||||||||                                                                                                    
‑‑‑‑‑AGGCCGGATAAGGCGTTCACGCCGCATCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  210/2923‑2891
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATCATGCCTACAACCGTTGCCGAACGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGC  >  58/1‑100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.