| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 191 | = 1328 | 64 (0.960) | 55 (0.980) +GGTGATGCTGCCAACT |
42/168 | 0.5 | 67.2% | intergenic (–/–) | –/– | –/– |
| ? | 223 | = 698 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
AAGCTAACAACCTTATCGGATGGCATTTTAATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 191/1230‑1328‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCT < 223/698‑621 |||||||||||||||| AAGCTAACAACCTTATCGGATGGCATTTTAATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGG < 2:1614438/101‑1 GCTAACAACCTTATCGGATGGCATTTTAATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGgg > 2:685110/1‑99 CTAACAACCTTATCGGATGGCATTTTAATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGA > 1:597518/1‑101 ACAACCTTATCGGATGGCATTTTAATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGC > 1:1672786/1‑101 CAACCTTATCGGATGGCATTTTAATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCT < 2:1412208/101‑1 CTTATCGGATGGCATTTTAATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCA < 1:1149792/101‑1 CTTATCGGATGGCATTTTAATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCA > 1:1705216/1‑101 TCGGATGGCATTTTAATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTT < 2:57178/101‑1 GATGGCATTTTAATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACT < 1:1347984/101‑1 GATGGCATTTTAATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACT > 1:1455069/1‑101 GATGGCATTTTAATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACT > 1:1571276/1‑101 ATGGCATTTTAATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTG > 2:226028/1‑101 ATGGCATTTTAATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTG > 1:1073534/1‑101 CATTTTAATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTT > 2:1221602/1‑101 CATTTTAATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTT > 2:1392172/1‑101 ATTTTAATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTA > 2:1314667/1‑101 TTTAATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGT > 1:205613/1‑101 ATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTAT < 1:729115/101‑1 ATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTAT > 2:257051/1‑101 AACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGA < 1:516791/101‑1 ACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGAT < 1:1695647/101‑1 ATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGG < 2:723440/101‑1 CATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTG < 1:684188/101‑1 TCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTT < 1:984974/101‑1 CACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTT < 1:862808/101‑1 CCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTT < 2:1640747/101‑1 CCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTT < 2:857519/101‑1 CTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTG < 1:846620/101‑1 CTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTG < 1:478123/101‑1 ACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAG > 2:985871/1‑101 ACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAG < 2:1553481/101‑1 CGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGG < 1:685115/101‑1 GGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGT > 2:1034887/1‑101 GGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGAGTTAGTGTATGATGGTGTTTTTGAGGT > 1:297898/1‑101 TGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAG > 2:4149/1‑101 TGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAG < 1:114326/101‑1 GCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGT < 1:1457685/101‑1 GCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTAAGATGGTGTTTTTGAGGTGCTCCAGT < 1:770797/101‑1 TTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG > 2:1430616/1‑101 TTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG > 1:219043/1‑101 TTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG > 2:1527025/1‑101 TTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG > 2:539882/1‑101 TATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGC > 2:1598260/1‑101 TAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATTCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTT < 1:1141293/101‑1 ACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCT < 2:413369/101‑1 CAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGT > 2:996050/1‑101 CAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGT < 2:147148/101‑1 AGGCGAAAAGCTAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTT < 1:1134750/101‑1 GGCGAAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTT < 2:1571270/101‑1 AAAAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTTTTNTTGAGGTGCTCCAGTGGCTTCTGTTTCTAn < 1:256711/101‑2 AAGCCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTTTGTTTCTATCA < 2:1578106/101‑1 CCAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCATCT < 1:985876/101‑1 CAGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTG < 2:1714075/101‑1 AGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGT < 1:1153778/101‑1 AGCAAGCATATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGT < 1:1221607/101‑1 TATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTG < 1:699511/101‑1 TATCCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTG > 2:420566/1‑101 CCAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTC > 1:1344476/1‑101 CAGTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCA > 2:1239774/1‑101 GTGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGC > 2:920239/1‑101 TGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCT > 2:1332704/1‑101 TGAATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCT > 2:1534143/1‑101 |||||||||||||||| AAGCTAACAACCTTATCGGATGGCATTTTAATAACATCATCACCTACGGTTATTTGCTTATAACCAGGCGAAAAGCCAGCAAGCATATCCAGTGAATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 191/1230‑1328‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCT < 223/698‑621 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |