New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	178	= 7327	0 (0.000)	50 (0.820)	47/182	0.0	67.6%	intergenic (–/–)	–/–	–/–
	?	191	= 2433	48 (0.790)					intergenic (–/–)	–/–	–/–

TGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  178/7220‑7327 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atatggcagCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGT  <  191/2433‑2334                                                                                                                                                                                                                  TGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGAT                                                                                                             <  1:1473841/101‑1   ACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATAT                                                                                                           >  1:792806/1‑101   ACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATAT                                                                                                           <  1:446501/101‑1    CGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACCCAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATG                                                                                                          <  2:616408/101‑1    CGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATG                                                                                                          <  2:1607992/101‑1      GTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGC                                                                                                        >  1:992831/1‑101        TTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAG                                                                                                      >  1:1200170/1‑101          CATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCA                                                                                                    <  1:509076/101‑1            TCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGT                                                                                                  >  2:1162356/1‑101              GTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTGTGACAGCCCCCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAA                                                                                                >  2:1594943/1‑101                   TGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATC                                                                                           >  1:466998/1‑101                       GGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAG                                                                                       >  2:657474/1‑101                       GGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAG                                                                                       <  2:1200165/101‑1                        GTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGGGGGGATATGGCAGCGGTAAAAATTTCAGG                                                                                      >  1:340339/1‑101                           ATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGT                                                                                   >  2:1253837/1‑101                            TAAATTCTGATTAGCCAGGTAACACAGTGTTATGCCAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTG                                                                                  <  2:1676647/101‑1                              AATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCT                                                                                >  1:1269501/1‑101                               ATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTG                                                                               >  2:1584709/1‑101                                     ATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGGAAAAATCTCAGGGGTGCTGAAAGAT                                                                         >  1:1527767/1‑101                                        AGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGT                                                                      >  2:1384925/1‑101                                        AGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGT                                                                      <  2:992826/101‑1                                            AGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGG                                                                  <  2:1424641/101‑1                                             GGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGG                                                                 <  2:1141718/101‑1                                              GTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGA                                                                >  2:1028667/1‑101                                              GTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGA                                                                >  2:1058033/1‑101                                                AACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAA                                                              <  1:919329/101‑1                                                AACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAA                                                              >  1:1169849/1‑101                                                 ACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAA                                                             >  1:1655126/1‑101                                                  CACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAAC                                                            <  1:536042/101‑1                                                     AGTGTTGTGAGAGCCCGCAGGTTCAGGCGGGCTTTTTTGTGGAGTGGATACGTCAACAATAAAAATCTCAGTTGTGCTGAAAGATGGTGCGGGAAAACCAA                                                         <  2:242527/101‑1                                                      GTGTTATGAGAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCACCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAAT                                                        <  2:354139/101‑1                                                           ATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGA                                                   >  1:1113365/1‑101                                                           ATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGA                                                   <  1:361865/101‑1                                                           ATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGA                                                   >  1:432492/1‑101                                                            TGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAA                                                  >  2:249745/1‑101                                                            TGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAA                                                  <  2:1464060/101‑1                                                             GACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAAC                                                 >  2:1405232/1‑101                                                              ACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACT                                                >  1:1670343/1‑101                                                               CAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGCGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTG                                               >  1:1692919/1‑101                                                                AGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGC                                              >  1:331937/1‑101                                                                 GCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCA                                             <  2:1473750/101‑1                                                                    CGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTA                                          >  2:861205/1‑101                                                                     GCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTAT                                         >  2:1406184/1‑101                                                                        GGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCA                                      >  1:1462551/1‑101                                                                        GGTTCAGGCGGGCTTTTNNNTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCA                                      <  2:335290/101‑1                                                                           TCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACT                                   <  2:662090/101‑1                                                                            CAGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTG                                  <  1:145138/101‑1                                                                             AGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGA                                 >  1:1476735/1‑101                                                                             AGGCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGA                                 >  2:60886/1‑101                                                                               GCGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAG                               <  2:1432863/101‑1                                                                                CGGGCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGG                              >  1:1464700/1‑101                                                                                   GCTTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAA                           <  1:312286/101‑1                                                                                     TTTTTTGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAG                         >  1:598757/1‑101                                                                                          TGTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAA                    <  1:715529/101‑1                                                                                           GTGGAGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAAC                   <  1:781742/101‑1                                                                                               AGTGGATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCA               <  1:1058038/101‑1                                                                                                   GATATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCAC           >  1:260832/1‑101                                                                                                      ATGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGT        <  2:1651254/101‑1                                                                                                       TGGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAATTGAAGGCAAAGCGTAACAGCACCACGGTA       <  1:1253842/101‑1                                                                                                        GGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTAC      <  1:657479/101‑1                                                                                                        GGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTAC      <  1:1384931/101‑1                                                                                                        GGCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTAC      <  2:1670337/101‑1                                                                                                         GCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACT     >  1:1474760/1‑101                                                                                                         GCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACT     <  1:540542/101‑1                                                                                                         GCAGCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACT     <  2:1072124/101‑1                                                                                                            GCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGT  >  2:775179/1‑101                                                                                                                                                                                                                  TGACGGTTTCATCGTGGGTGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGAGTGGATATGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  178/7220‑7327 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atatggcagCAGTAAAAATCTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAAGGCAAAGCGTAACAGCACCACGGTACTGGT  <  191/2433‑2334

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.