New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	176	= 7365	0 (0.000)	38 (0.570)	26/200	1.9	54.3%	intergenic (–/–)	–/–	–/–
	?	91	= 8425	64 (0.960)					intergenic (–/–)	–/–	–/–

AAATTTATTTTATGGATAAATTGCGAAGCGGAATTAATTCGCGAAGAAAAGCAGAAAAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  176/7267‑7365 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCCGGATGCGGAGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGT  <  91/8425‑8339                                                                                                                                                                                            AAATTTATTTTATGGATAAATTGCGAAGCGGAATTAATTCGCGAAGAAAAGCAGAAAAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTG                                                                                       >  2:1364801/1‑101           TATGGATAAATTGCGAAGCGGAATTAATTCGCGAAGAAAAGCAGAAAAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGG                                                                             <  2:1093101/101‑1            ATGGATAAATTGCGAAGCGGAATTAATTCGCGAAGAAAAGCAGAAAAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGc                                                                            >  2:568695/1‑100            ATGGATAAATTGCGAAGCGGAATTAATTCGCGAAGAAAAGCAGAAAAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGc                                                                            <  1:1417193/101‑2             TGGATAAATTGCGAAGCGGAATTAATTCGCGAAGAAAAGCAGAAAAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGcg                                                                           <  2:1170376/101‑3              GGATAAATTGCGAAGCGGAATTAATTCGCGAAGAAAAGCAGAAAAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGT                                                                          >  2:1657584/1‑101                ATAAATTGCGAAGCGGAATTAATTCGCGAAGAAAAGCAGAAAAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGg                                                                        >  1:577638/1‑100                  AAATTGCGAAGCGGAATTAATTCGCGAAGAAAAGCAGAAAAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAAC                                                                      >  1:974367/1‑101                   AATTGCGAAGCGGAATTAATTCGCGAAGAAAAGCAGAAAAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACG                                                                     >  2:1001390/1‑101                        CGAAGCGGAATTAATTCGCGAAGAAAAGCAGAAAAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTt                                                                >  1:75620/1‑100                              GGAATTAATTCGCGAAGAAAAGCAGAAAAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTTTCCGGC                                                          >  2:537499/1‑101                               GAATTAATTCGCGAAGAAAAGCAGAAAAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCC                                                         >  2:1316899/1‑101                               GAATTAATTCGCGAAGAAAAGCAGAAAAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCC                                                         >  1:365461/1‑101                               GAATTAATTCGCGAAGAAAAGCAGAAAAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGGGGACGCCCTTTCCCGCC                                                         >  2:914989/1‑101                                  TTAATTCGCGAAGAAAAGCAGAAAAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACACCTTATCCGGCCTAC                                                      >  1:1269384/1‑101                                        CGCGAAGAAAAGCAGAAAAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGC                                                <  2:1082316/101‑1                                            AAGAAAAGCAGAAAAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCACGC                                            >  1:273478/1‑101                                                       AAAAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAACTCAATAT                                 <  2:1681328/101‑1                                                         AAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAACTCAATATAT                               >  1:1148350/1‑101                                                         AAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAACTCAATATAT                               <  1:1364807/101‑1                                                         AAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAACTCAATATAT                               >  2:835928/1‑101                                                          AAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCCGGAAACCCTTATACGGCCTACAAAAAAACGCAAACTCAATATATT                              >  2:905751/1‑101                                                                CGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAACTCAATATATTGCAGAG                        <  2:610720/101‑1                                                                  CTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAACTCAATATATTGCAGAGAT                      <  2:1719542/101‑1                                                                   TGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAACTCAATATATTGCAGAGATc                     <  2:116378/101‑2                                                                   TGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAACTCAATATATTGCAGAGATc                     <  1:80149/101‑2                                                                   TGAACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACACCCAAAGTCAAATTATTGCGGAGATc                     >  1:1566280/1‑100                                                                     AACGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAACTCAATATATTGCAGAGATcat                   <  1:835933/101‑4                                                                       CGCGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAACTCAATATATTGCAGAGATcatgt                 <  2:974362/101‑6                                                                         CGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAACTCAATATATTGCAGAGATcatgtag               <  2:1510244/101‑8                                                                         CGGCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAACTCAATATATTGCAGAGATcatgtag               <  1:1237033/101‑8                                                                           GCGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAACTCAATATATTGCAGAGATCATGTAGGC             <  2:199668/101‑1                                                                            CGTTTTGGATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAACTCAATATATTGCAGAGATCATGTAGGCC            >  1:799536/1‑101                                                                                   GATTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAACTCAATATATTGCAGAGATCATGTAGGCCTGATAAG     >  1:208611/1‑101                                                                                     TTGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAACTCAATATATTGCAGAGATCATGTAGGCCTGATAAGCG   >  1:777209/1‑101                                                                                      TGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAACTCAATATATTGCAGAGATCATGTAGGCCTGATAAGCGT  <  1:1316905/101‑1                                                                                      TGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAACTCAATATATTGCAGAGATCATGTAGGCCTGATAAGCGT  <  1:1205191/101‑1                                                                                      TGTTTGCTGTTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAACTCAATATATTGCAGAGATCATGTAGGCCTGATAAGCGT  >  2:1527867/1‑101                                                                                                                                                                                            AAATTTATTTTATGGATAAATTGCGAAGCGGAATTAATTCGCGAAGAAAAGCAGAAAAAACGCCGCTGAACGCGGCGTTTTGGATTGTTTGCTGTTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  176/7267‑7365 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCCGGATGCGGAGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGT  <  91/8425‑8339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.