New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 172 | 54 = | 0 (0.000) | 30 (0.500) +TACGGTTCGG |
23/180 | 1.8 | 73.5% | intergenic (–/–) | –/– | –/– |
? | 190 | = 235 | 24 (0.360) | intergenic (–/–) | –/– | –/– |
CTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 172/152‑54 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGGCCGTTTCGG < 190/235‑141 |||||||||| CTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCTA > 2:1648402/1‑101 TCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACa < 1:1651466/101‑2 AAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACaaa > 2:1111075/1‑98 GGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGGTAATTATCTCGCCGAATACCGGGTCGGATACGGCGGGAACGCCCTATCCGACCTAtcaaac > 1:341833/1‑95 TGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGTGGCAGCGTCGCAACAGGCAATGAATGCGAAACCGCGG > 2:1423100/1‑101 GTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGT < 2:323182/101‑1 TCGGATGCGGCGTGAACGCCTTAGCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTG < 2:182488/101‑1 GGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTA < 2:133061/101‑1 GATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAA < 1:1665626/101‑1 GATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAA > 2:257763/1‑101 ATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAA > 1:1369425/1‑101 TGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAAT < 1:1522510/101‑1 GGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAAC < 1:1271552/101‑1 GTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGAC > 1:1005437/1‑101 GTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGAC > 2:981693/1‑101 GTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGAC < 2:281748/101‑1 GTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGAC < 2:1542391/101‑1 GTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGAC > 2:1443398/1‑101 GTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGAC > 1:1569841/1‑101 AACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAA < 2:880310/101‑1 AACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAA > 1:1070872/1‑101 CGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATA > 1:1680636/1‑101 CTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAA > 1:975317/1‑101 CTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAA > 2:1719711/1‑101 TTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAA > 2:766105/1‑101 ATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAAT > 2:1113966/1‑101 ATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAAT < 2:920613/101‑1 CCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTG < 1:1548519/101‑1 CGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGG < 1:1178495/101‑1 ACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGGCC > 2:970641/1‑101 CCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGGCCG > 2:60055/1‑101 CCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGGCCG > 2:1357329/1‑101 CTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGGCCGT > 2:912214/1‑101 CTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGGCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGGCCGT > 1:1183811/1‑101 GGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGGCCGTTTCG < 2:418501/101‑1 GTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGGCCGTTTCGG > 1:327234/1‑101 GTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGGCCGTTTCGG < 1:257763/101‑1 |||||||||| CTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 172/152‑54 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGGCCGTTTCGG < 190/235‑141 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |