New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 172 54 =0 (0.000)30 (0.500)
+TACGGTTCGG
23/180 1.8 73.5% intergenic (–/–) –/– –/–
?190 = 235 24 (0.360)intergenic (–/–) –/– –/–

CTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  172/152‑54
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGGCCGTTTCGG  <  190/235‑141
                                                                                                   ||||||||||                                                                                               
CTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCTA                                                                                                         >  2:1648402/1‑101
  TCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACa                                                                                                       <  1:1651466/101‑2
    AAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACaaa                                                                                                     >  2:1111075/1‑98
      GGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGGTAATTATCTCGCCGAATACCGGGTCGGATACGGCGGGAACGCCCTATCCGACCTAtcaaac                                                                                                   >  1:341833/1‑95
                                                                   TGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGTGGCAGCGTCGCAACAGGCAATGAATGCGAAACCGCGG                                      >  2:1423100/1‑101
                                                                    GTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGT                                     <  2:323182/101‑1
                                                                     TCGGATGCGGCGTGAACGCCTTAGCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTG                                    <  2:182488/101‑1
                                                                       GGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTA                                  <  2:133061/101‑1
                                                                        GATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAA                                 <  1:1665626/101‑1
                                                                        GATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAA                                 >  2:257763/1‑101
                                                                         ATGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAA                                >  1:1369425/1‑101
                                                                          TGCGGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAAT                               <  1:1522510/101‑1
                                                                             GGCGTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAAC                            <  1:1271552/101‑1
                                                                                GTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGAC                         >  1:1005437/1‑101
                                                                                GTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGAC                         >  2:981693/1‑101
                                                                                GTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGAC                         <  2:281748/101‑1
                                                                                GTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGAC                         <  2:1542391/101‑1
                                                                                GTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGAC                         >  2:1443398/1‑101
                                                                                GTGAACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGAC                         >  1:1569841/1‑101
                                                                                   AACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAA                      <  2:880310/101‑1
                                                                                   AACGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAA                      >  1:1070872/1‑101
                                                                                     CGCCTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATA                    >  1:1680636/1‑101
                                                                                        CTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAA                 >  1:975317/1‑101
                                                                                        CTTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAA                 >  2:1719711/1‑101
                                                                                         TTATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAA                >  2:766105/1‑101
                                                                                           ATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAAT              >  2:1113966/1‑101
                                                                                           ATCCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAAT              <  2:920613/101‑1
                                                                                             CCGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTG            <  1:1548519/101‑1
                                                                                              CGACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGG           <  1:1178495/101‑1
                                                                                                ACCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGGCC         >  2:970641/1‑101
                                                                                                 CCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGGCCG        >  2:60055/1‑101
                                                                                                 CCTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGGCCG        >  2:1357329/1‑101
                                                                                                  CTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGGCCGT       >  2:912214/1‑101
                                                                                                  CTACGGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGGCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGGCCGT       >  1:1183811/1‑101
                                                                                                      GGTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGGCCGTTTCG   <  2:418501/101‑1
                                                                                                       GTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGGCCGTTTCGG  >  1:327234/1‑101
                                                                                                       GTTCGGTTTTGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGGCCGTTTCGG  <  1:257763/101‑1
                                                                                                   ||||||||||                                                                                               
CTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  172/152‑54
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGCAATGAATGCGAAACCGCGGTGTAAATAACGACAAATATAAAATTGGCCGTTTCGG  <  190/235‑141

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.