| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 170 | = 7767 | 0 (0.000) | 64 (0.980) +CT |
50/196 | 0.2 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 223 | = 698 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GTATCGCCTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 170/7668‑7767‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGA < 223/698‑616 || GTATCGCCTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAAC < 1:1195171/101‑1GTATCGCCTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAAC < 2:1549177/101‑1 TATCGCCTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACT > 2:1364098/1‑101 ATCGCCTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTT > 2:531162/1‑101 TCGCCTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGAGATGCTGCCAACTTA < 1:746855/101‑1 GCCTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACT < 2:508414/101‑1 CCTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTG < 1:918057/101‑1 CTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGA < 2:617845/101‑1 TACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGAT > 1:346739/1‑101 GAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAG < 1:198144/101‑1 AGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGT < 2:1611126/101‑1 TGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTCATTTAGTGTA < 2:1140354/101‑1 GCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGA < 1:508611/101‑1 CAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGAT > 2:1258857/1‑101 CAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGAT > 1:190651/1‑101 AAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATG > 2:49392/1‑101 AAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATG < 1:637458/101‑1 AAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGG < 1:742116/101‑1 AGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGT < 2:500715/101‑1 GAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTG < 2:1358032/101‑1 GAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTT < 1:250587/101‑1 AAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTT > 2:299053/1‑101 AAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTT > 1:676419/1‑101 ATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGCTGCTGCCAACTTACTGATTTAGTGTATGATGGTGCTTTT > 2:486392/1‑101 ATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTT > 1:1338900/1‑101 TTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTG < 1:749567/101‑1 TTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTG < 2:1645491/101‑1 TTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTTTTTTTG < 2:254638/101‑1 TTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGA > 1:1421551/1‑101 CCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGG < 1:531167/101‑1 TTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGC > 1:310343/1‑101 TCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTC < 2:939911/101‑1 CTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCC > 2:790173/1‑101 CTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCC > 2:1608290/1‑101 CTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCC < 2:351090/101‑1 TCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCA < 2:1647301/101‑1 CTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAG < 2:538700/101‑1 TCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGT > 2:1565728/1‑101 TCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGT > 1:771890/1‑101 TCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGT > 1:1526923/1‑101 CGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTG > 1:153293/1‑101 CGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTG > 2:1643771/1‑101 GTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG > 2:319703/1‑101 TTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCT < 1:730228/101‑1 TTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCT < 2:619055/101‑1 TTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCT > 1:1357058/1‑101 TTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCT < 1:522106/101‑1 TCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTAT < 1:990712/101‑1 TCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTAT < 1:232702/101‑1 TCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAG > 2:212657/1‑101 CATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGC > 1:764749/1‑101 ATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTcttgcag < 2:1703514/101‑8 ATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCT > 2:1124524/1‑101 ATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCT < 1:1179800/101‑1 TCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTG < 1:1627174/101‑1 ATTTGACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGCTTCTATCAGCTGTCCCTCC > 1:385563/1‑101 GACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTT < 2:1603261/101‑1 ACCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTC > 2:1297046/1‑101 CCCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCA < 1:1519009/101‑1 CCATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAG > 1:1044617/1‑101 CATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGC > 1:1464823/1‑101 ATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGCTGGTGTTTTTGAGGTGCTCCAGGGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCCGCT > 1:356843/1‑101 ATTCTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCT > 2:1249680/1‑101 CTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACT > 2:904195/1‑101 TCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG < 2:812521/101‑1 TCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG > 1:210947/1‑101 CCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGc > 2:1586407/1‑100 || GTATCGCCTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCGGTGATGCTGCCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 170/7668‑7767‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGA < 223/698‑616 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |