New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	166	1 =	0 (0.000)	76 (1.180)	60/194	0.1	100%	intergenic (–/–)	–/–	–/–
	?	34	4 =	0 (0.000)					intergenic (–/–)	–/–	–/–

ACCCGTTTTGTATCAGGACCGCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  166/103‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAGGTCGAGGTTATCTATCGCGCGTCAC  >  34/4‑103                                                                                                                                                                                                             ACCCGTTTTGTATCAGGACCGCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGC                                                                                                        >  2:1214140/1‑101  CCCGTTTTGTATCAGGACCGCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCT                                                                                                       >  2:1304083/1‑101  CCCGTTTTGTATCAGGACCGCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCT                                                                                                       <  1:541494/101‑1     GTTTTGTATCAGGACCGCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGT                                                                                                    >  1:1035560/1‑101     GTTTTGTATCAGGACCGCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGT                                                                                                    >  1:874253/1‑101     GTTTTGTATCAGGACCGCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATAACTGGACGCCCGACAGCCAGTGGCTGGT                                                                                                    >  2:1334890/1‑101      TTTTGTATCAGGACCGCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGga                                                                                                   >  1:1451798/1‑99       TTTGTATCAGGACCGCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTAT                                                                                                  >  1:1499425/1‑101       TTTGTATCAGGACCGCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTAT                                                                                                  >  1:616113/1‑101       TTTGTATCAGGACCGCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGGAT                                                                                                  >  1:62693/1‑101        TTGTATCAGGACCGCGCTATGAAACAGATAACCTTTGTTCCCCGTAATCACCTGCTCACCAATACCAATACCTTGACGCCCGACAGCCATTGGCTGGGATT                                                                                                 >  2:253929/1‑101        TTGTATCAGGACCGCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCTCCAATACAAATACCTGGACGCCCGACAGCCAGTGGCTGGcttt                                                                                                 >  2:822038/1‑97          tTATCAGGACCGCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTG                                                                                               <  1:1138726/100‑1          GTATCAGGACCGCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCCCCTGCTCACCAATACCAATCCCTGGACGCCCGACAGCCAGTGGCTGGTATTTG                                                                                               <  2:1190512/101‑1           TATCAGGACCGCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGA                                                                                              >  1:500101/1‑101           TATCAGGACCGCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGA                                                                                              <  2:294587/101‑1              CAGGACCGCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGT                                                                                           <  2:1103569/101‑1                 GACCGCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCG                                                                                        <  2:797111/101‑1                    CGCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCC                                                                                     <  2:959996/101‑1                     GCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCT                                                                                    <  1:1592240/101‑1                      CGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTT                                                                                   <  2:1357714/101‑1                       GCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTTACGTGCGTCCTTC                                                                                  >  2:1578243/1‑101                       GCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTC                                                                                  >  2:914665/1‑101                        CTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCT                                                                                 <  2:1361414/101‑1                        CTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCT                                                                                 <  2:863395/101‑1                        CTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGGATTTGACGTGCGTCCTTCT                                                                                 >  2:1206644/1‑101                         TATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTG                                                                                >  1:1340986/1‑101                          ATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGG                                                                               >  1:675058/1‑101                           TGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGG                                                                              <  2:675053/101‑1                           TGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGAATTTGACGTGCGTCCTTCTGGG                                                                              >  2:1348315/1‑101                              AACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTTACGTGCGTCCTTCTGGGGCG                                                                           >  1:879023/1‑101                                 AGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGGCG                                                                        >  2:596576/1‑101                                  GATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGT                                                                       >  2:908393/1‑101                                   ATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTT                                                                      <  1:917260/101‑1                                    TAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTT                                                                     <  1:824237/101‑1                                     AACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTA                                                                    <  1:640811/101‑1                                        CTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCG                                                                 >  1:1271409/1‑101                                         TTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGG                                                                <  2:324907/101‑1                                         TTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGG                                                                <  2:1451792/101‑1                                          TTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGC                                                               <  2:450302/101‑1                                             CTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAG                                                            >  1:572255/1‑101                                             CTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAG                                                            >  2:835223/1‑101                                             CTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAG                                                            >  1:1204277/1‑101                                               CCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGAC                                                          >  1:1307529/1‑101                                                  CGTAATCACCTGCTCACCAATTCCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCAT                                                       <  2:155957/101‑1                                                   GTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATT                                                      >  2:901466/1‑101                                                    TAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTG                                                     >  1:1210596/1‑101                                                     AATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGA                                                    >  1:940528/1‑101                                                      ATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAG                                                   <  2:616108/101‑1                                                         ACCTGCTCACCAATACCAATACCTGCACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGT                                                <  1:1083785/101‑1                                                           CTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGT                                              <  2:133634/101‑1                                                           CTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGT                                              <  1:266559/101‑1                                                            TGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTG                                             >  1:937509/1‑101                                                              CTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAA                                           >  1:1221448/1‑101                                                              CTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAA                                           >  2:220691/1‑101                                                                CACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATA                                         <  1:1306318/101‑1                                                                   CAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCC                                      <  1:56997/101‑1                                                                     ATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCAT                                    <  1:901471/101‑1                                                                     ATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCAT                                    <  1:106341/101‑1                                                                     ATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCAT                                    <  1:1070638/101‑1                                                                        CCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACC                                 <  1:440028/101‑1                                                                          AATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGG                               >  1:150218/1‑101                                                                           ATACCTGGACGCCCGACAGCCAGTGGCTGGGATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGC                              >  1:1130652/1‑101                                                                              CCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAG                           <  2:500096/101‑1                                                                               CTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAGG                          >  2:909749/1‑101                                                                                TGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAGGT                         <  2:940523/101‑1                                                                                 GGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAGGTC                        <  2:1425556/101‑1                                                                                 GGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAGGTC                        <  1:704661/101‑1                                                                                    CGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAGGTCGAG                     <  1:1197374/101‑1                                                                                     GCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAGGTCGAGG                    <  2:1499419/101‑1                                                                                      CCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGAGAGGTCGAGGT                   >  2:553193/1‑101                                                                                      CCCGACAGCCAGTGGCTGGTATGTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAGGTCGAGGT                   <  2:1094207/101‑1                                                                                       CCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAGGTCGAGGTT                  <  2:1524549/101‑1                                                                                           CAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAGGTCGAGGTTATCT              <  2:31808/101‑1                                                                                             GCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAGGTCGAGGTTATCTAT            <  2:1096883/101‑1                                                                                              CCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAGGTCGAGGTTATCTATC           <  1:1674554/101‑1                                                                                               CAGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAGGTCGAGGTTATCTATCG          >  1:1190160/1‑101                                                                                                AGTGGCTGGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAGGTCGAGGTTATCTATCGC         <  1:1369165/101‑1                                                                                                AGTGGCT‑GTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAGGTCGAGGGTATCTATCGCG        >  1:1027502/1‑101                                                                                                       GGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAGGTCGAGGTTATCTATCGCGCGTCAC  >  2:307699/1‑101                                                                                                                                                                                                             ACCCGTTTTGTATCAGGACCGCGCTATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  166/103‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgGTATTTGACGTGCGTCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAGGTCGAGGTTATCTATCGCGCGTCAC  >  34/4‑103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.