New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 149 = 98950 (0.000)28 (0.470)
+GACGCGTCAG
24/180 1.7 100% intergenic (–/–) –/– –/–
?49 1 = 0 (0.000)intergenic (–/–) –/– –/–

GCAAGGTTGTTTGCGCCGGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  149/9797‑9895
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTCGCATCAGGCATCGGAGCACAACTGCCGGATTCGGCGTGAACGCCTTATCCGA  >  49/1‑56
                                                                                                   ||||||||||                                                        
GCAAGGTTGTTTGCGCCGGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGA                                                                  >  1:460415/1‑101
 CAAGGTTGTTTGCGCCGGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGAC                                                                 <  2:201523/101‑1
       TGTTTGCGCCGGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCA                                                           <  2:917012/101‑1
           TGCGCCGGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGT                                                       <  2:751692/101‑1
             CGCCGGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCG                                                     <  2:371301/101‑1
              GCCGGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGC                                                    >  2:1062408/1‑101
                CGGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCAT                                                  >  1:1630404/1‑101
                 GGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATC                                                 <  2:1567468/101‑1
                    GCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGG                                              <  2:1528531/101‑1
                     CTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGC                                             >  2:801400/1‑101
                     CTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGC                                             >  2:201886/1‑101
                      TGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCA                                            <  2:1512491/101‑1
                      TGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCA                                            >  2:639093/1‑101
                       GCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCAT                                           <  2:1704327/101‑1
                       GCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCAT                                           >  1:1242528/1‑101
                         ATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCG                                         <  2:1643272/101‑1
                                    TATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACcg                              <  2:154647/101‑3
                                          GAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGAT                        <  1:1227039/101‑1
                                           AAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATg                       >  2:409750/1‑100
                                           AAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATg                       >  1:1277026/1‑100
                                            AGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATgc                      <  1:1282804/101‑3
                                            AGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATgc                      >  1:578741/1‑99
                                             GTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCG                     <  1:67759/101‑1
                                                  GGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTG                >  2:1047378/1‑101
                                                   GATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGA               >  1:1220593/1‑101
                                                     TGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAAC             >  2:1410672/1‑101
                                                       AGCTGGAGTTGAAGATTAGGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAACGC           <  2:935097/101‑1
                                                        GCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAACGCC          <  1:1047383/101‑1
                                                         CTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAACGCCT         >  2:1510025/1‑101
                                                               TTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAACGCCTTATCCG   >  1:109896/1‑101
                                                                TGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAACGCCTTATCCGg  >  2:391037/1‑100
                                                                                                   ||||||||||                                                        
GCAAGGTTGTTTGCGCCGGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  149/9797‑9895
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTCGCATCAGGCATCGGAGCACAACTGCCGGATTCGGCGTGAACGCCTTATCCGA  >  49/1‑56

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.