New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 149 | = 9895 | 0 (0.000) | 28 (0.470) +GACGCGTCAG |
24/180 | 1.7 | 100% | intergenic (–/–) | –/– | –/– |
? | 49 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
GCAAGGTTGTTTGCGCCGGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 149/9797‑9895 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTCGCATCAGGCATCGGAGCACAACTGCCGGATTCGGCGTGAACGCCTTATCCGA > 49/1‑56 |||||||||| GCAAGGTTGTTTGCGCCGGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGA > 1:460415/1‑101 CAAGGTTGTTTGCGCCGGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGAC < 2:201523/101‑1 TGTTTGCGCCGGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCA < 2:917012/101‑1 TGCGCCGGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGT < 2:751692/101‑1 CGCCGGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCG < 2:371301/101‑1 GCCGGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGC > 2:1062408/1‑101 CGGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCAT > 1:1630404/1‑101 GGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATC < 2:1567468/101‑1 GCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGG < 2:1528531/101‑1 CTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGC > 2:801400/1‑101 CTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGC > 2:201886/1‑101 TGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCA < 2:1512491/101‑1 TGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCA > 2:639093/1‑101 GCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCAT < 2:1704327/101‑1 GCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCAT > 1:1242528/1‑101 ATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCG < 2:1643272/101‑1 TATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACcg < 2:154647/101‑3 GAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGAT < 1:1227039/101‑1 AAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATg > 2:409750/1‑100 AAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATg > 1:1277026/1‑100 AGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATgc < 1:1282804/101‑3 AGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATgc > 1:578741/1‑99 GTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCG < 1:67759/101‑1 GGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTG > 2:1047378/1‑101 GATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGA > 1:1220593/1‑101 TGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAAC > 2:1410672/1‑101 AGCTGGAGTTGAAGATTAGGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAACGC < 2:935097/101‑1 GCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAACGCC < 1:1047383/101‑1 CTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAACGCCT > 2:1510025/1‑101 TTGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAACGCCTTATCCG > 1:109896/1‑101 TGAAGATTATGGGGGCGTTGATGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAACGCCTTATCCGg > 2:391037/1‑100 |||||||||| GCAAGGTTGTTTGCGCCGGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAGGCATGATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 149/9797‑9895 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTCGCATCAGGCATCGGAGCACAACTGCCGGATTCGGCGTGAACGCCTTATCCGA > 49/1‑56 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |